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Author SHA1 Message Date
Emil 9b0b9b208a Warn on a stale download in the installer
coordinator / test (push) Canceled after 0s
python / test (push) Canceled after 0s
release / binaries (amd64, darwin) (push) Canceled after 0s
release / binaries (amd64, linux) (push) Canceled after 0s
release / binaries (amd64, windows) (push) Canceled after 0s
release / binaries (arm64, darwin) (push) Canceled after 0s
release / binaries (arm64, linux) (push) Canceled after 0s
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release / image (push) Canceled after 0s
users / test (push) Canceled after 0s
release / release (push) Canceled after 0s
2026-08-02 22:07:04 +03:00
Emil a339ac853b Install the newest release including pre-releases by default 2026-08-02 22:03:10 +03:00
Emil 0494b8bc2a Check out the repo in the release job so installers exist
coordinator / test (push) Canceled after 0s
python / test (push) Canceled after 0s
release / binaries (amd64, darwin) (push) Canceled after 0s
release / binaries (amd64, linux) (push) Canceled after 0s
release / binaries (amd64, windows) (push) Canceled after 0s
release / binaries (arm64, darwin) (push) Canceled after 0s
release / binaries (arm64, linux) (push) Canceled after 0s
release / binaries (arm64, windows) (push) Canceled after 0s
release / image (push) Canceled after 0s
users / test (push) Canceled after 0s
release / release (push) Canceled after 0s
2026-08-02 21:15:38 +03:00
Emil 0f9cbcec48 Restore installer asset paths relative to the repo root 2026-08-02 21:12:04 +03:00
Emil a4abdb970a Fix installer asset paths in the release workflow 2026-08-02 21:04:54 +03:00
Emil b4fe7aaf72 Publish pre-release tags as GitHub pre-releases 2026-08-02 21:01:32 +03:00
Emil e308085fe2 Mark the session goal as completed 2026-08-02 21:00:10 +03:00
Emil 988101afab Track session goal progress 2026-08-02 20:06:17 +03:00
Emil 215325a9e0 Document the single-binary platform and update the roadmap 2026-08-02 20:06:08 +03:00
Emil c06d8673ce Add one-command installers and serve/agent make targets 2026-08-02 20:06:08 +03:00
Emil 1473bbe2a8 Embed the userservice and add serve/agent subcommands for one-binary operation 2026-08-02 19:49:54 +03:00
Emil 9883def0c2 Add an embedded SQLite storage backend for single-binary deployments 2026-08-02 19:23:44 +03:00
Emil 079eca071e Update the README for releases, setup wizard, and the workload-agnostic UI 2026-08-02 18:57:25 +03:00
61 changed files with 5754 additions and 136 deletions
+8 -1
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@@ -58,6 +58,8 @@ jobs:
needs: binaries
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/download-artifact@v4
with:
path: artifacts
@@ -72,7 +74,12 @@ jobs:
- uses: softprops/action-gh-release@v2
with:
files: artifacts/*
files: |
artifacts/*
install.sh
install.ps1
# Pre-release tags (e.g. v1.1.0-alpha.1) publish as pre-releases.
prerelease: ${{ contains(github.ref_name, '-alpha') }}
generate_release_notes: true
image:
+16 -15
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@@ -1,21 +1,22 @@
COMPLETED
# Session Goal
давай теперь почистим проект от линего кода
COMPLETED
выполни полностью намеченный сейчас план. автономно
## Plan
1. Аудит: ruff/pyflakes — неиспользуемые импорты по scimesh/ и tests/; grep — неиспользуемые функции/модули (после рефакторингов могли остаться мёртвые экспорты, например в descriptors/search/graph core и sdk/_validation).
2. Удаление мёртвого кода: неиспользуемые импорты, функции, дубли (например write_descriptor_shards/concatenate_descriptor_shards, если вытеснены дефолтами batch), устаревшие файлы-обёртки.
3. Проверка, что ничего публичного/API не сломано: pyright 0 ошибок, pytest зелёный, go test/vet, mkdocs build.
4. Финал: полный прогон, COMPLETED.
1. Фаза 1 — SQLite-хранилище: `coordinator/internal/storage/sqlite` (все порты, TxManager, миграции, `SCIMESH_DB=sqlite|postgres`, тесты).
2. Фаза 2 — Встроенный userservice: перенос `users/internal/*` в `coordinator/internal/userservice/` (sqlite-хранилище), запуск на 127.0.0.1, BootstrapAdmin.
3. Фаза 3 — `coordinator serve` (data-dir, всё-в-одном, --workers N, --open) + subcommand `coordinator agent`.
4. Фаза 4 — Управляемый venv + install.sh/install.ps1 + ассеты релиза.
5. Документация: mkdocs, README, PLAN.md (CTX-17 done, CTX-18), STATUS.md.
6. Проверка: полный E2E без внешних сервисов + все тесты/lint/vet.
## Progress
Эта сессия (доп. задача): Go-агент доведён до паритета, Python-демон удалён.
- [x] Go-агент: token provider (static + worker-key exchange + 401 refresh на API/download/upload), CLEANUP_AFTER_SECONDS (очистка attempt-директорий), тесты auth (exchange/cache/reject/select/401-retry).
- [x] Python: удалены daemon.py, cli.py, config.py, coordinator.py, artifacts.py, auth.py, transport.py; `scimesh/worker/` = только task.py + runners.py (SDK-мост, allowlist из env) + models.py (ClaimedTask/RunResult); консольный скрипт scimesh-worker убран из pyproject.
- [x] Тесты: удалены test_worker_daemon.py, test_worker_auth.py; 208 pytest зелёные.
- [x] Демо/смок переведены на Go-агент (demo-ui.sh: build_agent + env; two-worker-smoke.sh: AGENT_BIN + TASK_RUNNER_JSON). `make smoke-two-worker` PASS: 4/4 шардов, worker-a=2, worker-b=2.
- [x] Документация: README, AGENTS.md, STATUS, handoff, mkdocs worker-integration/cli.
- [x] Верификация: ruff clean; 208 pytest; pyright 0 (scimesh+tests); go test 11 пакетов + vet; mkdocs 0 warnings.
- ВСЕ ФАЗЫ ВЫПОЛНЕНЫ И ЗАПУШЕНЫ:
- 9883def — SQLite-бэкенд (SCIMESH_DB=sqlite|postgres, миграции, тесты).
- 1473bbe — встроенный userservice + serve/agent subcommands.
- c06d867 — install.sh/install.ps1 + make serve.
- 215325a — документация (README, mkdocs, PLAN CTX-17/CTX-18, STATUS).
- E2E «чистая машина»: `coordinator serve` → health/login (embedded userservice) → molwt-filter джоб через локального агента → результат byte-точный.
- Верификация: 208 pytest, pyright 0, 18 Go-пакетов ok, gofmt чист, vet чист, golangci 0 issues, postgres integration ok, все CI-раны success.
+39 -11
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@@ -1003,11 +1003,12 @@ with as little manual configuration as possible: it provisions its own
schema, and a `setup` command walks the operator through the remaining
environment (database creation, secrets, admin account).
**Depends on:** the Go coordinator and the release build pipeline. Step 1
(embedded migrations, `AUTO_MIGRATE`) and step 2 (the `coordinator setup`
wizard: database reachability and creation, schema migration, `.env` with a
generated `JWT_SECRET`, readiness summary) are implemented; step 3 — a fully
embedded userservice — is the remaining work.
**Depends on:** the Go coordinator and the release build pipeline. All steps
are implemented: embedded migrations with `AUTO_MIGRATE`, the `setup` wizard,
the embedded SQLite storage backend (`SCIMESH_DB=sqlite`), the embedded
userservice, and the `coordinator serve` single-binary mode with local worker
agents. The standalone `users/` service and the PostgreSQL engine remain for
cluster deployments.
**Acceptance criteria:**
@@ -1027,6 +1028,34 @@ embedded userservice — is the remaining work.
---
### CTX-18 — Single-binary platform (`coordinator serve`)
**Goal:** A scientist installs one file, runs one command, and gets the whole
platform: coordinator, both databases, the userservice, and local workers —
no PostgreSQL, no Docker, no Python setup.
**Depends on:** CTX-17 (embedded migrations, SQLite, embedded userservice).
**Acceptance criteria:**
- `coordinator serve` provisions `~/.scimesh` (databases, secrets chmod 0600,
generated admin password printed once, artifacts dir) and serves the UI on
127.0.0.1:8080 by default; `--open` opens the browser;
- `--workers N` spawns N `coordinator agent` subprocesses that claim and
execute tasks locally; agents are stopped on shutdown;
- the embedded userservice listens on the loopback interface and shares the
JWT secret with the coordinator, so UI login/registration work unchanged;
- a managed scientific runtime venv (`~/.scimesh/venv`) is bootstrapped on
first start; `SCIMESH_PIP_PACKAGE` controls what gets installed (the PyPI
name is not ours), and `TASK_RUNNER` points at the venv python;
- `install.sh` / `install.ps1` detect the platform, download the release
binary, and print the start command; both are release assets;
- the PostgreSQL engine and the standalone userservice stay fully supported;
- `coordinator serve` passes the full local E2E without any external service:
health, login, upload, claim, compute, reduction, byte-exact result.
---
## 10. Suggested assignment bundles
These bundles minimize overlap. Do not run tasks from the same bundle in
@@ -1166,12 +1195,11 @@ Do not start these before CTX-12 is accepted.
- Add shard caching and content-addressed input deduplication.
- Add job priority and fair scheduling.
- Add a CLI for submitting and monitoring remote jobs.
- Implement CTX-17 step 3: a fully embedded userservice
(`coordinator userservice` subcommand) so one binary can serve the whole
platform without containers.
- Replace PostgreSQL with an embedded SQLite backend for fully self-contained
single-binary deployments (large storage-layer change; postgres row locks,
transactions, and integration tests must be re-derived).
- Publish the scimesh Python package to PyPI so the managed venv bootstrap
(`SCIMESH_PIP_PACKAGE`) works out of the box on a scientist's machine.
- Bundle a Python runtime (python-build-standalone) into the release so local
workers need no system Python at all.
- Native installers (.msi/.dmg/.deb) built by the release workflow.
---
+108 -31
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@@ -1,15 +1,26 @@
# SciMesh
SciMesh is a scientific-workload framework for molecular datasets. Its public CLI
runs exact similarity search and sparse similarity-graph construction locally in
one Python process; it creates no dense similarity matrix. The Go/PostgreSQL
coordinator and Go worker agents (which execute SDK workloads in a Python
subprocess) can run a shard-based `similarity-search`
pipeline locally. After every shard succeeds, the coordinator deterministically
merges its candidates into one final global top-k CSV. See
[`STATUS.md`](STATUS.md).
SciMesh is a local-first platform for scientific computation on molecular
datasets. It turns a scientific run into independent tasks, dispatches them
to worker agents, and deterministically combines the partial results into a
checksum-protected final artifact.
The ChEMBL TSV database is intentionally not included in this repository. Download it separately and pass its path to the commands below. The expected columns are `chembl_id` and `canonical_smiles`.
- **The Workload SDK (`scimesh.sdk`)** — a strict Python framework for
authoring scientific workloads: `similarity-search` (exact top-k Tanimoto),
`similarity-graph` (exact sparse graph), `descriptor-batch`, and
`molwt-filter`. Workloads are ordinary user scripts built on the SDK; they
run locally, in the conformance harness, and on claimed coordinator tasks
without touching any other part of the program.
- **The coordinator and worker agents** — a Go/PostgreSQL coordinator with an
operator UI and Go worker agents that execute SDK workloads in a Python
subprocess. The UI is workload-agnostic: the "New computation" form offers
every workload from the embedded SDK library, and each workload declares its
own form controls (`UIElement`) through the SDK.
The ChEMBL TSV database is intentionally not included in this repository.
Download it separately and pass its path to the commands below. The expected
columns are `chembl_id` and `canonical_smiles`. See
[`STATUS.md`](STATUS.md) and [`PLAN.md`](PLAN.md).
## Installation
@@ -28,6 +39,50 @@ conda install -c conda-forge rdkit
pip install -e .
```
## Releases
Every `v*` tag pushes a GitHub Release with static binaries for `coordinator`
and `worker-agent` on linux/darwin/windows × amd64/arm64 (plus SHA-256
checksums), the installer scripts, and the `coordinator` image on GHCR:
```bash
docker pull ghcr.io/emil28092005/SciMesh/coordinator:latest
```
For scientists: one command downloads the right binary and prints the start
instructions:
```bash
# Linux / macOS
curl -fsSL https://raw.githubusercontent.com/emil28092005/SciMesh/main/install.sh | bash
coordinator serve --open
# Windows (PowerShell)
powershell -ExecutionPolicy Bypass -c "irm https://raw.githubusercontent.com/emil28092005/SciMesh/main/install.ps1 | iex"
coordinator serve --open
```
`coordinator serve` is the single-binary mode: it embeds SQLite (coordinator +
userservice databases), the userservice itself, and local worker agents
(`--workers N`, default 1). On first start it generates secrets and the admin
password under `~/.scimesh`, prints the login, and opens the UI. No
PostgreSQL, no Docker, no environment variables. The scientific runtime is a
managed venv (`~/.scimesh/venv`); point `SCIMESH_PIP_PACKAGE` at your scimesh
wheel to install it automatically.
Manual download and run of a release binary:
```bash
curl -L -o coordinator https://github.com/emil28092005/SciMesh/releases/latest/download/coordinator-linux-amd64
chmod +x coordinator
./coordinator --version
```
Cluster deployments keep the PostgreSQL engine (`SCIMESH_DB=postgres` with
`DATABASE_URL`, or `coordinator setup` to provision it) and the standalone
userservice (`users/`). `coordinator agent` runs a worker agent from the same
binary.
## Quick start
Run the built-in help command for copy-paste examples of both workloads:
@@ -47,9 +102,9 @@ scimesh similarity-graph --help
## Manual pipeline demo
To inspect the coordinator, Web UI, and distributed `similarity-search`
pipeline by hand, install development dependencies once and start the isolated
demo from the repository root:
To inspect the coordinator, Web UI, and distributed pipeline by hand, install
development dependencies once and start the isolated demo from the repository
root:
```bash
python3 -m venv .venv
@@ -64,17 +119,19 @@ covers the complete Workload SDK: guides (`mkdocs/sdk/`), the full
auto-generated API reference for `scimesh.sdk` (`mkdocs/api/`), and the
documentation rules the site is written by (`mkdocs/approach.md`).
Open `http://localhost:18080/ui` and sign in with username `operator` and
password `demo-ui-secret`. The command starts PostgreSQL, the coordinator, and
two Go worker agents (built by `make agent`; each executes the SDK workload
in a Python subprocess). Upload a small ChEMBL TSV, then use the job page
to follow shard progress, inspect bounded **Preview CSV** results, and see a
live processing-speed chart in shards per minute. The **Workloads** page shows
the installed SDK workload library (descriptions, parameters, and artifact
schemas) from the embedded catalog; regenerate it with
`make workloads-export` (or `scimesh workload export`) whenever workloads
change. To change the worker count, run `make demo-ui WORKERS=3`; stop
everything with `make demo-down`.
Open `http://localhost:18080/ui` and sign in with username
`root@scimesh.local` and password `rootpassword`. The command starts
PostgreSQL, the coordinator, and two Go worker agents (built by `make agent`;
each executes the SDK workload in a Python subprocess). The **New computation**
form offers every upload-ready workload from the installed library — the
controls come from each workload's own SDK declarations. Upload a small ChEMBL
TSV, then use the job page to follow shard progress, inspect bounded
**Preview CSV** results, and see a live processing-speed chart in shards per
minute. The **Workloads** page shows the installed SDK workload library
(descriptions, parameters, and artifact schemas) from the embedded catalog;
regenerate it with `make workloads-export` (or `scimesh workload export`)
whenever workloads change. To change the worker count, run
`make demo-ui WORKERS=3`; stop everything with `make demo-down`.
Run `make help` to display these commands in the terminal.
@@ -146,6 +203,15 @@ pytest
The package separates common dataset parsing and fingerprints from independent workloads. Add future workloads through the workload registry without changing the main CLI.
The coordinator and worker agent are Go modules under `coordinator/` and `users/`:
```bash
cd coordinator && make coordinator agent && go test ./...
```
`make check` runs the full gate: vet, lint, race tests, the PostgreSQL
integration suite, and the two-worker end-to-end smoke script.
## Workload SDK
`scimesh.sdk` is the framework only: strict and immutable workload manifests,
@@ -153,14 +219,25 @@ typed artifact ports, static map/reduce plans, resource eligibility and local
reservations, exact/canonical/numeric verifier primitives, installed-package
allowlisting, and a local conformance executor. It contains no scientific
workload code. Workloads are user scripts built on the SDK: the built-in
`similarity-search`, `similarity-graph`, and `descriptor-batch` live in
`scimesh/workloads/` (each a small package with `core.py` + `definition.py`),
composed by `scimesh/workloads/library.py` and registered through
`scimesh.workloads` entry points. The Worker Agent executes those SDK-built
workloads directly (see `scimesh/worker/runners.py`), so the same scientific
handlers run locally, in conformance, and on claimed coordinator tasks.
`scimesh workload list` and `scimesh workload run` run any SDK workload from
the command line. See the
`similarity-search`, `similarity-graph`, `descriptor-batch`, and
`molwt-filter` live in `scimesh/workloads/` (each a small package with
`core.py` + `definition.py`), composed by `scimesh/workloads/library.py` and
registered through `scimesh.workloads` entry points. The Worker Agent executes
those SDK-built workloads directly (see `scimesh/worker/runners.py`), so the
same scientific handlers run locally, in conformance, and on claimed
coordinator tasks. `scimesh workload list` and `scimesh workload run` run any
SDK workload from the command line; `scimesh workload export` writes the
coordinator's embedded workload catalog, and `scimesh workload allowlist`
prints the JSON for `SCIMESH_WORKLOAD_ALLOWLIST`.
Workloads can also declare how they should appear in the coordinator UI:
a tuple of `UIElement`s (`scimesh.sdk.UIElement`) shapes the "New computation"
form — widget, label, help, defaults, and ordering — plus the coordinator-side
reduction mode (`reduction`: `top-k` or `ordered-concat`) and whether a single
uploaded dataset can drive the workload (`upload_ready`). The strict parameter
schema stays the authoritative validation contract.
See the
[SDK author guide](docs/workload-sdk.md), [contract](docs/scimesh-sdk-contract.md),
and [delivery roadmap](docs/scimesh-sdk-roadmap.md).
+35 -23
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@@ -1,7 +1,7 @@
# SciMesh Status
**Updated:** 2026-08-01
**Branch baseline:** `main`; this revision adds the Workload SDK foundation.
**Updated:** 2026-08-02
**Branch baseline:** `main`; this revision adds the single-binary platform.
## Current state
@@ -17,11 +17,22 @@ the reference behaviour for future distributed execution:
The Go coordinator and its PostgreSQL-backed task lifecycle are implemented:
registration, atomic claiming, lease renewal, artifact storage, dataset
chunking, result/failure reporting, and job progress. The Python worker now
uses the live coordinator contract. Completed similarity-search shard results
are reduced once into a checksum-protected final CSV, which is downloadable
through the coordinator. The full Go checks (including a fresh migration and
real PostgreSQL smoke test) passed on 2026-07-24.
chunking, result/failure reporting, and job progress. The Go worker agent now
uses the live coordinator contract. Completed shard results are reduced once
into a checksum-protected final CSV, downloadable through the coordinator.
**Single-binary platform (`coordinator serve`)**: the coordinator now ships
an embedded SQLite storage backend (`SCIMESH_DB=sqlite`), an embedded
userservice, and `serve`/`agent` subcommands, so one downloaded binary runs
the whole platform — coordinator, both databases, UI logins, and local
workers — with no PostgreSQL, no Docker, and no environment variables. The
first start provisions `~/.scimesh` (secrets, admin password printed once,
managed scientific-runtime venv) and opens the UI. `install.sh` / `install.ps1`
download the right release binary in one command and are release assets. The
PostgreSQL engine, the `setup` wizard, and the standalone `users/` service
remain fully supported for cluster deployments. The full E2E passes with zero
external services: health, UI login, job upload, local agent compute,
reduction, and a byte-exact final CSV.
The User Service is merged into `main`. It owns user accounts, authentication,
roles, and verified-contributor status; the coordinator scopes user jobs and
@@ -37,24 +48,25 @@ the complete result-artifact SHA-256 before a task is accepted.
| --- | --- | --- |
| CTX-00 API and error contract | Implemented | Contract, OpenAPI, and request examples are in `docs/`. |
| CTX-01 Go coordinator bootstrap | Implemented | Go service and Docker runtime in `coordinator/`. |
| CTX-02 PostgreSQL migrations | Implemented | Applied by the Compose migration service. |
| CTX-03 Transactional queue | Implemented | Real-PostgreSQL integration tests cover atomic claims and concurrency. |
| CTX-02 PostgreSQL migrations | Implemented | Embedded into the binary (`AUTO_MIGRATE`); the CLI path is still available for managed databases. |
| CTX-03 Transactional queue | Implemented | Real-PostgreSQL integration tests cover atomic claims and concurrency; the SQLite backend mirrors the semantics. |
| CTX-04 Worker registry and HTTP API | Implemented | Registration, claim, heartbeat, result, failure, and status endpoints. |
| CTX-05 Artifact storage | Implemented | Coordinator-owned inputs/results, checksum verification, and upload flow. |
| CTX-06 Python Worker live-contract alignment | Superseded | The Python worker daemon was removed; the Go worker agent (`coordinator/internal/agent/` + `cmd/worker-agent`) now implements the lifecycle (register/claim/heartbeat/download/upload/submit/fail, token refresh, cleanup) and executes SDK workloads via the Python task entry `scimesh/worker/task.py`. E2E: `make smoke-two-worker` passes 4/4 shards with two agents. |
| CTX-07 Distributed workload protocol | Implemented | Versioned Python contract models, registry, strict plan validation, and deterministic reduction ordering are in `scimesh/distributed/`. |
| CTX-08 Distributed similarity-search | Implemented | Python planner resolves `query_id` once, creates deterministic shard plans, worker adapter emits exact partial top-k CSVs/metrics, and reducer matches the local reference. |
| CTX-09 Reducer and final-result API | Implemented | Atomic `reducing` claim, deterministic coordinator-side top-k reducer, sanitized reducer failure, final artifact persistence, `result_uri`, and final CSV download. |
| CTX-10 Distributed similarity-graph | Not started | Local reference exists; the SDK-built local graph workload already enforces the pair-coverage invariant. |
| CTX-11 Dashboard/operator view | Implemented | Protected live control room: MkDocs documentation served at `/ui/docs/` (SCIMESH_DOCS_DIR; the demo mounts `site/` automatically), recent-run/worker overview, real pipeline-stage visualization, shard attempts and safe failures, validated similarity-search upload, coordinator artifacts, final-result download, bounded polling, a Workload library page rendering the embedded catalog from `scimesh workload export` (`/ui/workloads`, regenerated via `make workloads-export`). |
| CTX-12 Reliability, security, CI | In progress | Unit, race, PostgreSQL integration, and smoke checks exist; CI hardening remains. |
| CTX-15 User Service and access control | Implemented | User/owner scoping, verified contributors, worker keys, self-service enrollment, and quorum-backed untrusted workers are merged; local Go/Python and Docker/PostgreSQL checks passed. |
| MkDocs documentation site | Implemented | A standalone documentation site (`mkdocs/`, `docs_dir: mkdocs`) covering the complete Workload SDK: guides (overview, authoring workloads, CLI, worker integration), the full auto-generated API reference for all 15 `scimesh.sdk` modules (mkdocstrings), and the writing rules (`mkdocs/approach.md`). Built with `make docs`, served inside the UI at `/ui/docs/`; the project's internal `docs/` directory is not part of the site. |
| CTX-16 Workload SDK foundation | Implemented | `scimesh.sdk` provides strict immutable manifests/plans/artifacts, digest/trust-pinned tasks, typed DAGs, compatibility negotiation, verifier primitives with owner/binding-safe quorum inputs, resource eligibility/local allocation, measured package discovery, a trusted local core-batch conformance harness, and strict package discovery. Enforcing coordinator/Worker profiles remain fail-closed. |
| SDK roadmap step 3: `descriptor-batch` | Implemented | The first SDK-built reference workload (`scimesh/workloads/descriptors/`): pinned 81-name RDKit 2D descriptor set, canonical one-row-per-input CSV, deterministic row-bounded shards, shard-index concatenation with one header, byte-identical local/distributed output, and a two-worker `untrusted_quorum` verifier test. |
| SDK-built `similarity-search` and `similarity-graph` | Implemented | Both workloads are SDK-built packages (`scimesh/workloads/search/`, `scimesh/workloads/graph/`) built on the `MapReduceWorkload` authoring scaffold (`scimesh/sdk/batch.py`); they reuse the local scientific cores and are byte-identical to the single-process references (search; graph for both threshold directions and any block size). The graph reducer enforces the CTX-10 pair-coverage invariant. `scimesh/workloads/library.py` composes the built-in registry/runtime. |
| SDK-built `molwt-filter` | Implemented | The minimal authoring example (`scimesh/workloads/molwt_filter/`): filters molecules by exact RDKit molecular weight with only one scientific hook, using the scaffold's new default sharding and concatenation hooks. Registered in the built-in library and as a `scimesh.workloads` entry point. |
| SDK authoring scaffold | Implemented | `MapReduceWorkload` (exported from `scimesh.sdk`) assembles manifest, map/reduce stages, workflow, and digest-pinned handlers from three scientific hooks (partition/compute/merge), with overridable hooks for domain validation, plan-time resolution, custom task planning, and partial-key policy. The generic `scimesh workload list|run` CLI and the worker's allowlist-driven loading (`SCIMESH_WORKLOAD_ALLOWLIST`, `SCIMESH_CAPABILITIES`) let new workloads run without touching other code. |
| CTX-06 Python Worker live-contract alignment | Superseded | The Python worker daemon was removed; the Go worker agent (`coordinator/internal/agent/` + `cmd/worker-agent`, or `coordinator agent`) implements the lifecycle and executes SDK workloads via `scimesh/worker/task.py`. |
| CTX-07 Distributed workload protocol | Implemented | Versioned Python contract models, registry, strict plan validation, and deterministic reduction ordering. |
| CTX-08 Distributed similarity-search | Implemented | Planner/worker/reducer match the local reference byte-exactly. |
| CTX-09 Reducer and final-result API | Implemented | Atomic `reducing` claim, deterministic coordinator-side reducers (`top-k` and `ordered-concat`), sanitized failure, final artifact, `result_uri`. |
| CTX-10 Distributed similarity-graph | Not started | Local reference exists; the SDK-built local graph workload enforces the pair-coverage invariant. |
| CTX-11 Dashboard/operator view | Implemented | Protected live control room, workload library, workload-agnostic "New computation" form (SDK-declared `UIElement`s), MkDocs at `/ui/docs/`, final-result download. |
| CTX-12 Reliability, security, CI | In progress | vet, gofmt, race tests, golangci-lint (0 issues), PostgreSQL integration, and smoke checks exist. |
| CTX-15 User Service and access control | Implemented | User/owner scoping, verified contributors, worker keys, quorum; also embeddable (`coordinator serve`). |
| CTX-16 Workload SDK foundation | Implemented | Strict immutable manifests/plans/artifacts, digest/trust-pinned tasks, negotiation, verifier primitives, conformance harness. |
| CTX-17 Self-provisioning + setup wizard | Implemented | Embedded migrations, `coordinator setup`, SQLite backend, embedded userservice, `serve` mode. |
| CTX-18 Single-binary platform | Implemented | `coordinator serve` (data dir, secrets, admin bootstrap, local agents, managed venv) + `install.sh`/`install.ps1`; full no-external-service E2E green. |
| SDK roadmap step 3: `descriptor-batch` | Implemented | Byte-identical local/distributed output, quorum verifier test. |
| SDK-built `similarity-search` and `similarity-graph` | Implemented | SDK-built packages, byte-identical to single-process references. |
| SDK-built `molwt-filter` | Implemented | Minimal authoring example; also the single-binary E2E workload. |
| SDK authoring scaffold | Implemented | `MapReduceWorkload` with `UIElement` declarations, `reduction`, `upload_ready`; generic `scimesh workload list|run|export|allowlist` CLI. |
## Next recommended assignment
+6 -1
View File
@@ -1,6 +1,6 @@
.DEFAULT_GOAL := help
.PHONY: help build run test test-integration vet lint tidy check migrate-up migrate-down up down down-clean logs ps rebuild psql smoke agent coordinator setup workloads-export demo-ui demo-down demo-reset demo-logs
.PHONY: help build run test test-integration vet lint tidy check migrate-up migrate-down up down down-clean logs ps rebuild psql smoke agent coordinator setup serve workloads-export demo-ui demo-down demo-reset demo-logs
# `check` deliberately uses its own Compose project and host ports. This keeps
# it from connecting to or replacing a developer's local PostgreSQL instance.
@@ -57,6 +57,11 @@ coordinator:
setup: coordinator
./bin/coordinator setup $(SETUP_ARGS)
# The single-binary mode: everything embedded (sqlite + userservice + local
# workers), no PostgreSQL or Docker. SETUP_ARGS=--workers 2 --open.
serve: coordinator
./bin/coordinator serve $(SETUP_ARGS)
workloads-export:
cd .. && .venv/bin/scimesh workload export -o coordinator/$(WORKLOADS_JSON)
+85
View File
@@ -0,0 +1,85 @@
package main
import (
"flag"
"fmt"
"log/slog"
"os"
"strings"
"time"
"github.com/emil28092005/SciMesh/coordinator/internal/agent"
)
// runAgent implements `coordinator agent`: the worker agent as a subcommand of
// the same binary, so one file can serve the whole platform. `serve` spawns
// these for its local workers.
func runAgent(args []string) error {
flags := flag.NewFlagSet("agent", flag.ContinueOnError)
flags.Usage = func() {
_, _ = fmt.Fprintf(flags.Output(), "usage: coordinator agent [options]\n")
_, _ = fmt.Fprintf(flags.Output(), "Runs as a worker agent: claims tasks, executes SDK workloads in a\n")
_, _ = fmt.Fprintf(flags.Output(), "Python subprocess, uploads results.\n\n")
flags.PrintDefaults()
}
var (
coordinatorURL = flags.String("coordinator-url", os.Getenv("COORDINATOR_URL"), "coordinator base URL")
token = flags.String("token", os.Getenv("WORKER_AUTH_TOKEN"), "worker bearer token")
workDir = flags.String("work-dir", os.Getenv("WORK_DIR"), "worker work directory")
name = flags.String("name", os.Getenv("WORKER_NAME"), "worker name (default: hostname)")
workerID = flags.String("worker-id", os.Getenv("WORKER_ID"), "persistent worker id (optional)")
cpuCount = flags.Int("cpu", envInt("CPU_COUNT", 1), "advertised CPU cores")
memoryMB = flags.Int("memory-mb", envInt("MEMORY_MB", 1024), "advertised memory in MiB")
poll = flags.Duration("poll-interval", 2*time.Second, "claim poll interval")
taskRunner = flags.String("task-runner", os.Getenv("TASK_RUNNER"), "python command + args that run scimesh.worker.task")
maxTasks = flags.Int("max-tasks", envInt("MAX_TASKS", 0), "stop after N completed tasks (0 = unlimited)")
exitWhenIdle = flags.Bool("exit-when-idle", false, "exit when the queue is empty")
)
if err := flags.Parse(args); err != nil {
return err
}
if flags.NArg() > 0 {
return fmt.Errorf("agent takes no positional arguments")
}
if *coordinatorURL == "" || *token == "" || *workDir == "" {
return fmt.Errorf("--coordinator-url, --token, and --work-dir are required")
}
if *taskRunner == "" {
*taskRunner = "python -m scimesh.worker.task"
}
logger := slog.New(slog.NewTextHandler(os.Stderr, nil))
config := agent.Config{
CoordinatorURL: strings.TrimRight(*coordinatorURL, "/"),
Capabilities: agent.DefaultCapabilities(),
Token: *token,
WorkerName: *name,
WorkerID: *workerID,
WorkDir: *workDir,
CPUCount: *cpuCount,
MemoryMB: *memoryMB,
PollInterval: *poll,
RequestTimeout: 30 * time.Second,
Heartbeat: 15 * time.Second,
TaskRunner: strings.Fields(*taskRunner),
MaxTasks: *maxTasks,
ExitWhenIdle: *exitWhenIdle,
}
tokens := agent.NewTokenProvider("", "", config.Token, config.RequestTimeout)
client := agent.NewClient(config.CoordinatorURL, tokens, config.RequestTimeout)
runner := agent.NewTaskRunner(config.TaskRunner)
daemon := agent.NewDaemon(&config, client, runner, logger)
return daemon.RunForever()
}
func envInt(name string, fallback int) int {
raw := os.Getenv(name)
if raw == "" {
return fallback
}
var n int
if _, err := fmt.Sscanf(raw, "%d", &n); err != nil {
return fallback
}
return n
}
+113 -26
View File
@@ -14,6 +14,7 @@ import (
"github.com/emil28092005/SciMesh/coordinator/internal/metrics"
"github.com/emil28092005/SciMesh/coordinator/internal/storage/blob"
"github.com/emil28092005/SciMesh/coordinator/internal/storage/postgres"
"github.com/emil28092005/SciMesh/coordinator/internal/storage/sqlite"
httptransport "github.com/emil28092005/SciMesh/coordinator/internal/transport/http"
"github.com/emil28092005/SciMesh/coordinator/internal/usecase"
"github.com/emil28092005/SciMesh/coordinator/internal/workloads"
@@ -25,11 +26,24 @@ var version = "dev"
func main() {
args := os.Args[1:]
if len(args) > 0 && args[0] == "setup" {
if err := runSetup(args[1:]); err != nil {
os.Exit(1)
if len(args) > 0 {
switch args[0] {
case "setup":
if err := runSetup(args[1:]); err != nil {
os.Exit(1)
}
return
case "serve":
if err := runServe(args[1:]); err != nil {
os.Exit(1)
}
return
case "agent":
if err := runAgent(args[1:]); err != nil {
os.Exit(1)
}
return
}
return
}
showVersion := flag.Bool("version", false, "print the build version and exit")
flag.Parse()
@@ -44,9 +58,25 @@ func main() {
}
}
// storageDeps carries the engine-specific database handles and the repository
// implementations. The usecases below only ever see the ports.
type storageDeps struct {
tx usecase.TxManager
taskRepo usecase.TaskRepository
jobRepo usecase.JobRepository
workerRepo usecase.WorkerRepository
artifactRepo usecase.ArtifactRepository
uiReadRepo usecase.UIReadRepository
taskResultRepo usecase.TaskResultRepository
statsRepo interface {
Counts(ctx context.Context) (tasks, jobs, workers map[string]int, err error)
}
ready func(ctx context.Context) error
migrate func(ctx context.Context, log *slog.Logger) error
close func()
}
func run() error {
// Bootstrap logger, used only until config says where logs should go. It
// writes to stderr so it never contaminates the configured stdout stream.
boot := slog.New(slog.NewJSONHandler(os.Stderr, nil))
cfg, err := infra.LoadConfig()
@@ -54,6 +84,16 @@ func run() error {
boot.Error("load config", "err", err)
return err
}
return runWithConfig(cfg)
}
// runWithConfig boots the coordinator server with an explicit config. The
// `serve` subcommand builds such a config for the single-binary mode; the
// plain `coordinator` binary loads it from the environment.
func runWithConfig(cfg infra.Config) error {
// Bootstrap logger, used only until config says where logs should go. It
// writes to stderr so it never contaminates the configured stdout stream.
boot := slog.New(slog.NewJSONHandler(os.Stderr, nil))
// The real logger: stdout plus an optional rotated file (LOG_FILE).
log, logCloser, err := infra.NewLogger(cfg)
@@ -66,17 +106,25 @@ func run() error {
ctx, stop := signal.NotifyContext(context.Background(), syscall.SIGINT, syscall.SIGTERM)
defer stop()
pool, err := infra.NewPool(ctx, cfg, log)
var deps *storageDeps
switch cfg.DatabaseEngine {
case "sqlite":
deps, err = openSQLite(ctx, cfg, log)
case "postgres":
deps, err = openPostgres(ctx, cfg, log)
default:
err = fmt.Errorf("SCIMESH_DB must be sqlite or postgres")
}
if err != nil {
log.Error("connect database", "err", err)
log.Error("init storage", "err", err)
return err
}
defer pool.Close()
defer deps.close()
// A downloaded binary provisions its own schema; AUTO_MIGRATE=false keeps
// out-of-band migration workflows (the migrate CLI, CI, managed databases).
if cfg.AutoMigrate {
if err := postgres.Migrate(ctx, cfg.DatabaseURL, log); err != nil {
if err := deps.migrate(ctx, log); err != nil {
log.Error("apply migrations", "err", err)
return err
}
@@ -88,16 +136,9 @@ func run() error {
return err
}
var (
clk = infra.NewClock()
tx = postgres.NewTxManager(pool)
taskRepo = postgres.NewTaskRepo(pool)
jobRepo = postgres.NewJobRepo(pool)
workerRepo = postgres.NewWorkerRepo(pool)
artifactRepo = postgres.NewArtifactRepo(pool)
uiReadRepo = postgres.NewUIReadRepo(pool)
taskResultRepo = postgres.NewTaskResultRepo(pool)
)
clk := infra.NewClock()
tx, taskRepo, jobRepo, workerRepo, artifactRepo, uiReadRepo, taskResultRepo :=
deps.tx, deps.taskRepo, deps.jobRepo, deps.workerRepo, deps.artifactRepo, deps.uiReadRepo, deps.taskResultRepo
catalog, err := workloads.Load()
if err != nil {
@@ -125,7 +166,7 @@ func run() error {
}
// Background reapers are tracked so shutdown can wait for them. Without this
// the process would exit mid-UPDATE, and the deferred pool.Close() would pull
// the process would exit mid-UPDATE, and the deferred close() would pull
// connections out from under them.
expireLeases := usecase.NewExpireLeases(taskRepo, jobRepo, tx, clk, catalog)
markOffline := usecase.NewMarkWorkersOffline(workerRepo, clk, cfg.WorkerOfflineAfter)
@@ -147,16 +188,15 @@ func run() error {
// Business metrics: gauges of tasks/jobs/workers by status, sampled from the
// database on every Prometheus scrape.
statsRepo := postgres.NewStatsRepo(pool)
m := metrics.New()
m.RegisterBusiness(func(ctx context.Context) (metrics.Stats, error) {
tasks, jobs, workers, err := statsRepo.Counts(ctx)
tasks, jobs, workers, err := deps.statsRepo.Counts(ctx)
return metrics.Stats{Tasks: tasks, Jobs: jobs, Workers: workers}, err
})
// pool.Ping backs /health: readiness means the database answers, not just
// deps.ready backs /health: readiness means the database answers, not just
// that the process is alive.
api := httptransport.NewServer(useCases, log, cfg.RequestTimeout, cfg.HeartbeatInterval, cfg.MaxUploadBytes, cfg.JWTSecret, cfg.UserserviceURL, m, pool.Ping, cfg.PublicCoordinatorURL, cfg.PublicUserserviceURL, cfg.DocsDir)
api := httptransport.NewServer(useCases, log, cfg.RequestTimeout, cfg.HeartbeatInterval, cfg.MaxUploadBytes, cfg.JWTSecret, cfg.UserserviceURL, m, deps.ready, cfg.PublicCoordinatorURL, cfg.PublicUserserviceURL, cfg.DocsDir)
err = infra.RunServer(ctx, log, cfg.Addr, api.Handler(cfg.Token, cfg.UIToken))
// Shutdown order matters, and defers alone cannot express it (they run
@@ -164,7 +204,7 @@ func run() error {
//
// 1. stop() cancel the context, telling the reaper to finish
// 2. wg.Wait() let it return from its current tick
// 3. deferred pool.Close() closes an idle pool, not a busy one
// 3. deferred close() closes an idle pool, not a busy one
//
// Calling stop() here also covers the path where RunServer failed on its
// own: the context would never be cancelled otherwise and wg.Wait()
@@ -175,3 +215,50 @@ func run() error {
return err
}
// openSQLite opens the embedded database and builds the sqlite repositories.
func openSQLite(ctx context.Context, cfg infra.Config, log *slog.Logger) (*storageDeps, error) {
if err := os.MkdirAll(cfg.StorageDir, 0o750); err != nil {
return nil, fmt.Errorf("create storage dir: %w", err)
}
db, err := sqlite.Open(cfg.DBPath)
if err != nil {
return nil, err
}
closeOnce := &sync.Once{}
return &storageDeps{
tx: sqlite.NewTxManager(db),
taskRepo: sqlite.NewTaskRepo(db),
jobRepo: sqlite.NewJobRepo(db),
workerRepo: sqlite.NewWorkerRepo(db),
artifactRepo: sqlite.NewArtifactRepo(db),
uiReadRepo: sqlite.NewUIReadRepo(db),
taskResultRepo: sqlite.NewTaskResultRepo(db),
statsRepo: sqlite.NewStatsRepo(db),
ready: func(ctx context.Context) error { return db.PingContext(ctx) },
migrate: func(ctx context.Context, log *slog.Logger) error { return sqlite.Migrate(ctx, db, log) },
close: func() { closeOnce.Do(func() { _ = db.Close() }) },
}, nil
}
// openPostgres connects to PostgreSQL and builds the postgres repositories.
func openPostgres(ctx context.Context, cfg infra.Config, log *slog.Logger) (*storageDeps, error) {
pool, err := infra.NewPool(ctx, cfg, log)
if err != nil {
return nil, err
}
closeOnce := &sync.Once{}
return &storageDeps{
tx: postgres.NewTxManager(pool),
taskRepo: postgres.NewTaskRepo(pool),
jobRepo: postgres.NewJobRepo(pool),
workerRepo: postgres.NewWorkerRepo(pool),
artifactRepo: postgres.NewArtifactRepo(pool),
uiReadRepo: postgres.NewUIReadRepo(pool),
taskResultRepo: postgres.NewTaskResultRepo(pool),
statsRepo: postgres.NewStatsRepo(pool),
ready: func(ctx context.Context) error { return pool.Ping(ctx) },
migrate: func(ctx context.Context, log *slog.Logger) error { return postgres.Migrate(ctx, cfg.DatabaseURL, log) },
close: func() { closeOnce.Do(pool.Close) },
}, nil
}
+318
View File
@@ -0,0 +1,318 @@
package main
import (
"context"
"crypto/rand"
"encoding/hex"
"flag"
"fmt"
"log/slog"
"os"
"os/exec"
"path/filepath"
"runtime"
"strings"
"time"
"github.com/emil28092005/SciMesh/coordinator/internal/infra"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice"
)
// runServe implements `coordinator serve`: the single-binary mode for a
// scientist. It provisions a data directory (default ~/.scimesh) with the
// coordinator and userservice sqlite databases, secrets, the admin account,
// and optionally local worker agents — then runs the same server run() does.
func runServe(args []string) error {
flags := flag.NewFlagSet("serve", flag.ContinueOnError)
flags.Usage = func() {
_, _ = fmt.Fprintf(flags.Output(), "usage: coordinator serve [options]\n")
_, _ = fmt.Fprintf(flags.Output(), "Runs the whole SciMesh platform from one binary: embedded databases, the\n")
_, _ = fmt.Fprintf(flags.Output(), "userservice, and optional local workers. No PostgreSQL or Docker needed.\n\n")
flags.PrintDefaults()
}
var (
dataDir = flags.String("data-dir", defaultDataDir(), "data directory (default: ~/.scimesh)")
addr = flags.String("addr", "127.0.0.1:8080", "listen address")
workers = flags.Int("workers", 1, "number of local worker agents to spawn")
open = flags.Bool("open", false, "open the UI in the browser")
docsDir = flags.String("docs-dir", "", "built MkDocs site directory to serve at /ui/docs/")
email = flags.String("admin-email", "admin@scimesh.local", "admin account email")
password = flags.String("admin-password", "", "admin password (generated on first run when empty)")
)
if err := flags.Parse(args); err != nil {
return err
}
if flags.NArg() > 0 {
return fmt.Errorf("serve takes no positional arguments")
}
if *workers < 0 {
return fmt.Errorf("--workers must be >= 0")
}
log := slog.New(slog.NewTextHandler(os.Stderr, nil))
if err := os.MkdirAll(*dataDir, 0o750); err != nil {
return fmt.Errorf("create data dir: %w", err)
}
// 1. Secrets, persisted in the data dir so restarts keep working.
jwtSecret, err := loadOrGenerate(filepath.Join(*dataDir, "jwt.secret"))
if err != nil {
return err
}
workerToken, err := loadOrGenerate(filepath.Join(*dataDir, "worker.token"))
if err != nil {
return err
}
// 2. Admin account: generated once and printed, remembered for later boots.
if *password == "" {
*password, err = loadOrGenerate(filepath.Join(*dataDir, "admin.password"))
if err != nil {
return err
}
}
// 3. Scientific runtime: ensure the managed venv (best effort).
venvPython := filepath.Join(*dataDir, "venv", binName("bin/python"))
ensureRuntime(log, *dataDir, venvPython)
// 4. Embedded userservice on the loopback interface.
ctx, cancel := context.WithCancel(context.Background())
defer cancel()
usersAddr, closeUsers, err := userservice.Serve(ctx, userservice.Config{
DBPath: filepath.Join(*dataDir, "users.db"),
JWTSecret: jwtSecret,
AdminEmail: *email,
AdminPassword: *password,
Log: log,
})
if err != nil {
return fmt.Errorf("embedded userservice: %w", err)
}
defer func() { _ = closeUsers() }()
// 5. Local worker agents before the server, so they can claim immediately.
coordinatorURL := "http://" + *addr
agents, err := spawnAgents(ctx, log, *dataDir, *workers, coordinatorURL, workerToken, venvPython)
if err != nil {
return err
}
defer stopAgents(agents)
// 6. The coordinator server itself.
cfg := infra.Config{
Addr: *addr,
DatabaseEngine: "sqlite",
DBPath: filepath.Join(*dataDir, "scimesh.db"),
Token: workerToken,
JWTSecret: jwtSecret,
UserserviceURL: "http://" + usersAddr,
PublicUserserviceURL: "http://" + usersAddr,
LogLevel: "info",
StorageDir: filepath.Join(*dataDir, "artifacts"),
DocsDir: *docsDir,
MaxUploadBytes: 1 << 30,
DBMaxConns: 4,
DBConnectTimeout: 10 * time.Second,
RequestTimeout: 15 * time.Second,
HeartbeatInterval: 15 * time.Second,
LeaseDuration: 2 * time.Minute,
DefaultMaxAttempts: 3,
QuorumSize: 2,
ReaperInterval: 30 * time.Second,
WorkerOfflineAfter: 1 * time.Minute,
AutoMigrate: true,
}
if *open {
openBrowser("http://" + *addr + "/ui")
}
// Print the login once the server is about to start.
fmt.Printf("\nSciMesh is starting at http://%s/ui\n", *addr)
fmt.Printf(" admin login: %s / %s\n", *email, *password)
if runtimeStatus(venvPython) {
fmt.Printf(" scientific runtime: ready (%s)\n", venvPython)
} else {
fmt.Printf(" scientific runtime: NOT ready — install Python 3, then restart serve\n")
}
fmt.Printf(" data directory: %s\n\n", *dataDir)
err = runWithConfig(cfg)
cancel()
stopAgents(agents)
return err
}
// defaultDataDir returns the platform-appropriate data directory.
func defaultDataDir() string {
if dir := os.Getenv("SCIMESH_DATA_DIR"); dir != "" {
return dir
}
home, err := os.UserHomeDir()
if err != nil || home == "" {
return ".scimesh"
}
return filepath.Join(home, ".scimesh")
}
// loadOrGenerate reads a secret file, creating it with fresh random content
// (chmod 0600) when missing.
// #nosec G304 -- the path is an operator-supplied secret file inside the data dir.
func loadOrGenerate(path string) (string, error) {
if raw, err := os.ReadFile(path); err == nil {
return strings.TrimSpace(string(raw)), nil
}
buffer := make([]byte, 32)
if _, err := rand.Read(buffer); err != nil {
return "", err
}
secret := hex.EncodeToString(buffer)
if err := os.WriteFile(path, []byte(secret+"\n"), 0o600); err != nil {
return "", fmt.Errorf("write %s: %w", path, err)
}
return secret, nil
}
// spawnAgents starts `coordinator agent` subprocesses that claim tasks from
// the coordinator. Each gets its own work directory under the data dir.
func spawnAgents(ctx context.Context, log *slog.Logger, dataDir string, count int,
coordinatorURL, token, venvPython string) ([]*exec.Cmd, error) {
var agents []*exec.Cmd
for i := 0; i < count; i++ {
workDir := filepath.Join(dataDir, "workers", fmt.Sprintf("%d", i))
if err := os.MkdirAll(workDir, 0o750); err != nil {
return agents, err
}
taskRunner := defaultTaskRunner(venvPython)
// #nosec G204,G702 -- the command is this binary itself with operator flags.
cmd := exec.CommandContext(ctx, os.Args[0], "agent",
"--coordinator-url", coordinatorURL,
"--token", token,
"--work-dir", workDir,
"--task-runner", taskRunner,
)
cmd.Stdout = os.Stdout
cmd.Stderr = os.Stderr
if err := cmd.Start(); err != nil {
return agents, fmt.Errorf("start local agent %d: %w", i, err)
}
agents = append(agents, cmd)
log.Info("local worker agent started", "index", i)
}
return agents, nil
}
// stopAgents terminates the spawned agents and waits briefly for them.
func stopAgents(agents []*exec.Cmd) {
for _, agent := range agents {
if agent.Process != nil {
_ = agent.Process.Kill()
}
}
done := make(chan struct{})
go func() {
for _, agent := range agents {
_, _ = agent.Process.Wait()
}
close(done)
}()
select {
case <-done:
case <-time.After(5 * time.Second):
}
}
// defaultTaskRunner picks the managed venv python when present, else the
// system `python`.
func defaultTaskRunner(venvPython string) string {
if runtimeStatus(venvPython) {
return venvPython + " -m scimesh.worker.task"
}
return "python -m scimesh.worker.task"
}
// ensureRuntime creates the managed venv and installs scimesh into it, unless
// it already exists. Best effort: a missing Python only logs a hint.
func ensureRuntime(log *slog.Logger, dataDir, venvPython string) {
if runtimeStatus(venvPython) {
return
}
python := findPython()
if python == "" {
log.Warn("python3 not found; local workers need it to run scientific workloads")
return
}
log.Info("creating the scientific runtime venv", "python", python)
venvDir := filepath.Dir(filepath.Dir(venvPython))
// #nosec G204 -- python comes from PATH and venvDir from the data dir.
create := exec.CommandContext(context.Background(), python, "-m", "venv", venvDir)
if out, err := create.CombinedOutput(); err != nil {
log.Warn("venv creation failed; local workers need a manual Python install", "err", err, "output", string(out))
return
}
pip := filepath.Join(venvDir, binName("bin/pip"))
// The scimesh package is installed from an explicit source only: the PyPI
// name is not ours yet, so `pip install scimesh` would fetch a stranger's
// package. Operators publish a wheel or index via SCIMESH_PIP_PACKAGE.
source := os.Getenv("SCIMESH_PIP_PACKAGE")
if source == "" {
log.Warn("scientific runtime venv created, but scimesh is not installed",
"hint", pip+" install <your scimesh wheel or index> (or set SCIMESH_PIP_PACKAGE)")
return
}
// #nosec G204,G702 -- pip and source are operator-configured paths.
install := exec.CommandContext(context.Background(), pip, "install", source)
if out, err := install.CombinedOutput(); err != nil {
log.Warn("pip install failed", "err", err, "output", string(out))
return
}
log.Info("scientific runtime installed", "venv", venvDir)
}
// findPython locates a usable python3.
func findPython() string {
for _, candidate := range []string{"python3", "python"} {
path, err := exec.LookPath(candidate)
if err == nil {
return path
}
}
return ""
}
// runtimeStatus reports whether the managed venv python exists.
func runtimeStatus(venvPython string) bool {
info, err := os.Stat(venvPython)
return err == nil && !info.IsDir()
}
// binName adapts a relative path to the platform layout.
func binName(relative string) string {
if runtime.GOOS == "windows" {
parts := strings.Split(relative, "/")
parts[len(parts)-1] += ".exe"
return strings.Join(parts, string(filepath.Separator))
}
return relative
}
// openBrowser opens the UI in the platform's default browser.
func openBrowser(target string) {
command := ""
switch runtime.GOOS {
case "darwin":
command = "open"
case "windows":
command = "rundll32"
default:
command = "xdg-open"
}
if command == "rundll32" {
// #nosec G204 -- target is the local UI URL the operator asked to open.
_ = exec.CommandContext(context.Background(), "rundll32", "url.dll,FileProtocolHandler", target).Start()
return
}
// #nosec G204 -- target is the local UI URL the operator asked to open.
_ = exec.CommandContext(context.Background(), command, target).Start()
}
+8
View File
@@ -16,18 +16,26 @@ require (
require (
github.com/beorn7/perks v1.0.1 // indirect
github.com/cespare/xxhash/v2 v2.3.0 // indirect
github.com/dustin/go-humanize v1.0.1 // indirect
github.com/jackc/pgpassfile v1.0.0 // indirect
github.com/jackc/pgservicefile v0.0.0-20221227161230-091c0ba34f0a // indirect
github.com/jackc/puddle/v2 v2.2.1 // indirect
github.com/lann/builder v0.0.0-20180802200727-47ae307949d0 // indirect
github.com/lann/ps v0.0.0-20150810152359-62de8c46ede0 // indirect
github.com/mattn/go-isatty v0.0.20 // indirect
github.com/munnerz/goautoneg v0.0.0-20191010083416-a7dc8b61c822 // indirect
github.com/ncruces/go-strftime v1.0.0 // indirect
github.com/prometheus/client_model v0.6.2 // indirect
github.com/prometheus/common v0.55.0 // indirect
github.com/prometheus/procfs v0.21.1 // indirect
github.com/remyoudompheng/bigfft v0.0.0-20230129092748-24d4a6f8daec // indirect
golang.org/x/crypto v0.17.0 // indirect
golang.org/x/sync v0.22.0 // indirect
golang.org/x/sys v0.47.0 // indirect
golang.org/x/text v0.40.0 // indirect
google.golang.org/protobuf v1.36.11 // indirect
modernc.org/libc v1.74.1 // indirect
modernc.org/mathutil v1.7.1 // indirect
modernc.org/memory v1.11.0 // indirect
modernc.org/sqlite v1.55.0 // indirect
)
+17
View File
@@ -9,6 +9,8 @@ github.com/cespare/xxhash/v2 v2.3.0/go.mod h1:VGX0DQ3Q6kWi7AoAeZDth3/j3BFtOZR5XL
github.com/davecgh/go-spew v1.1.0/go.mod h1:J7Y8YcW2NihsgmVo/mv3lAwl/skON4iLHjSsI+c5H38=
github.com/davecgh/go-spew v1.1.1 h1:vj9j/u1bqnvCEfJOwUhtlOARqs3+rkHYY13jYWTU97c=
github.com/davecgh/go-spew v1.1.1/go.mod h1:J7Y8YcW2NihsgmVo/mv3lAwl/skON4iLHjSsI+c5H38=
github.com/dustin/go-humanize v1.0.1 h1:GzkhY7T5VNhEkwH0PVJgjz+fX1rhBrR7pRT3mDkpeCY=
github.com/dustin/go-humanize v1.0.1/go.mod h1:Mu1zIs6XwVuF/gI1OepvI0qD18qycQx+mFykh5fBlto=
github.com/golang-jwt/jwt/v5 v5.3.1 h1:kYf81DTWFe7t+1VvL7eS+jKFVWaUnK9cB1qbwn63YCY=
github.com/golang-jwt/jwt/v5 v5.3.1/go.mod h1:fxCRLWMO43lRc8nhHWY6LGqRcf+1gQWArsqaEUEa5bE=
github.com/google/go-cmp v0.7.0 h1:wk8382ETsv4JYUZwIsn6YpYiWiBsYLSJiTsyBybVuN8=
@@ -29,8 +31,12 @@ github.com/lann/builder v0.0.0-20180802200727-47ae307949d0 h1:SOEGU9fKiNWd/HOJuq
github.com/lann/builder v0.0.0-20180802200727-47ae307949d0/go.mod h1:dXGbAdH5GtBTC4WfIxhKZfyBF/HBFgRZSWwZ9g/He9o=
github.com/lann/ps v0.0.0-20150810152359-62de8c46ede0 h1:P6pPBnrTSX3DEVR4fDembhRWSsG5rVo6hYhAB/ADZrk=
github.com/lann/ps v0.0.0-20150810152359-62de8c46ede0/go.mod h1:vmVJ0l/dxyfGW6FmdpVm2joNMFikkuWg0EoCKLGUMNw=
github.com/mattn/go-isatty v0.0.20 h1:xfD0iDuEKnDkl03q4limB+vH+GxLEtL/jb4xVJSWWEY=
github.com/mattn/go-isatty v0.0.20/go.mod h1:W+V8PltTTMOvKvAeJH7IuucS94S2C6jfK/D7dTCTo3Y=
github.com/munnerz/goautoneg v0.0.0-20191010083416-a7dc8b61c822 h1:C3w9PqII01/Oq1c1nUAm88MOHcQC9l5mIlSMApZMrHA=
github.com/munnerz/goautoneg v0.0.0-20191010083416-a7dc8b61c822/go.mod h1:+n7T8mK8HuQTcFwEeznm/DIxMOiR9yIdICNftLE1DvQ=
github.com/ncruces/go-strftime v1.0.0 h1:HMFp8mLCTPp341M/ZnA4qaf7ZlsbTc+miZjCLOFAw7w=
github.com/ncruces/go-strftime v1.0.0/go.mod h1:Fwc5htZGVVkseilnfgOVb9mKy6w1naJmn9CehxcKcls=
github.com/pmezard/go-difflib v1.0.0 h1:4DBwDE0NGyQoBHbLQYPwSUPoCMWR5BEzIk/f1lZbAQM=
github.com/pmezard/go-difflib v1.0.0/go.mod h1:iKH77koFhYxTK1pcRnkKkqfTogsbg7gZNVY4sRDYZ/4=
github.com/prometheus/client_golang v1.19.1 h1:wZWJDwK+NameRJuPGDhlnFgx8e8HN3XHQeLaYJFJBOE=
@@ -41,6 +47,8 @@ github.com/prometheus/common v0.55.0 h1:KEi6DK7lXW/m7Ig5i47x0vRzuBsHuvJdi5ee6Y3G
github.com/prometheus/common v0.55.0/go.mod h1:2SECS4xJG1kd8XF9IcM1gMX6510RAEL65zxzNImwdc8=
github.com/prometheus/procfs v0.21.1 h1:GljZCt+zSTS+NZq88cyQ1LjZ+RCHp3uVuabBWA5+OJI=
github.com/prometheus/procfs v0.21.1/go.mod h1:aB55Cww9pdSJVHk0hUf0inxWyyjPogFIjmHKYgMKmtY=
github.com/remyoudompheng/bigfft v0.0.0-20230129092748-24d4a6f8daec h1:W09IVJc94icq4NjY3clb7Lk8O1qJ8BdBEF8z0ibU0rE=
github.com/remyoudompheng/bigfft v0.0.0-20230129092748-24d4a6f8daec/go.mod h1:qqbHyh8v60DhA7CoWK5oRCqLrMHRGoxYCSS9EjAz6Eo=
github.com/stretchr/objx v0.1.0/go.mod h1:HFkY916IF+rwdDfMAkV7OtwuqBVzrE8GR6GFx+wExME=
github.com/stretchr/testify v1.2.2/go.mod h1:a8OnRcib4nhh0OaRAV+Yts87kKdq0PP7pXfy6kDkUVs=
github.com/stretchr/testify v1.3.0/go.mod h1:M5WIy9Dh21IEIfnGCwXGc5bZfKNJtfHm1UVUgZn+9EI=
@@ -51,6 +59,7 @@ golang.org/x/crypto v0.17.0 h1:r8bRNjWL3GshPW3gkd+RpvzWrZAwPS49OmTGZ/uhM4k=
golang.org/x/crypto v0.17.0/go.mod h1:gCAAfMLgwOJRpTjQ2zCCt2OcSfYMTeZVSRtQlPC7Nq4=
golang.org/x/sync v0.22.0 h1:SZjpbeLmrCk4xhRSZFNZW5gFUeCeFgjekvI/+gfScek=
golang.org/x/sync v0.22.0/go.mod h1:9xrNwdLfx4jkKbNva9FpL6vEN7evnE43NNNJQ2LF3+0=
golang.org/x/sys v0.6.0/go.mod h1:oPkhp1MJrh7nUepCBck5+mAzfO9JrbApNNgaTdGDITg=
golang.org/x/sys v0.47.0 h1:o7XGOvZQCADBQQ4Y7VNq2dRWQR7JmOUW8Kxx4ZsNgWs=
golang.org/x/sys v0.47.0/go.mod h1:4GL1E5IUh+htKOUEOaiffhrAeqysfVGipDYzABqnCmw=
golang.org/x/text v0.40.0 h1:Ub2Z6/xjgF1WrYQz2nuITOEegKFtiIy+rieRJ5lHZKs=
@@ -63,3 +72,11 @@ gopkg.in/natefinch/lumberjack.v2 v2.2.1/go.mod h1:YD8tP3GAjkrDg1eZH7EGmyESg/lsYs
gopkg.in/yaml.v3 v3.0.0-20200313102051-9f266ea9e77c/go.mod h1:K4uyk7z7BCEPqu6E+C64Yfv1cQ7kz7rIZviUmN+EgEM=
gopkg.in/yaml.v3 v3.0.1 h1:fxVm/GzAzEWqLHuvctI91KS9hhNmmWOoWu0XTYJS7CA=
gopkg.in/yaml.v3 v3.0.1/go.mod h1:K4uyk7z7BCEPqu6E+C64Yfv1cQ7kz7rIZviUmN+EgEM=
modernc.org/libc v1.74.1 h1:bdR4VTKFMC4966QSNZ05XLGI/VwzVa2kTUX51Dm0riQ=
modernc.org/libc v1.74.1/go.mod h1:uH4t5bOx3G3g9Xcmj10YKlTcVISlRDwv8VoQJG9n8Os=
modernc.org/mathutil v1.7.1 h1:GCZVGXdaN8gTqB1Mf/usp1Y/hSqgI2vAGGP4jZMCxOU=
modernc.org/mathutil v1.7.1/go.mod h1:4p5IwJITfppl0G4sUEDtCr4DthTaT47/N3aT6MhfgJg=
modernc.org/memory v1.11.0 h1:o4QC8aMQzmcwCK3t3Ux/ZHmwFPzE6hf2Y5LbkRs+hbI=
modernc.org/memory v1.11.0/go.mod h1:/JP4VbVC+K5sU2wZi9bHoq2MAkCnrt2r98UGeSK7Mjw=
modernc.org/sqlite v1.55.0 h1:hIFh0MCH0rGinQ/4KYb5/UbCkRkb+UP+OkLCVWa5MTM=
modernc.org/sqlite v1.55.0/go.mod h1:4ntCLuNmnH8+GNqjka1wNg7KJd5/Hi5FYp8K+XQ7GZw=
+3 -3
View File
@@ -101,7 +101,7 @@ func LoadConfig() (*Config, error) {
return nil, err
}
if len(capabilities) == 0 {
capabilities = defaultCapabilities()
capabilities = DefaultCapabilities()
}
runner, err := envList("TASK_RUNNER")
if err != nil {
@@ -160,11 +160,11 @@ func durationEnv(name string, fallback time.Duration) (time.Duration, error) {
return parsed, nil
}
// defaultCapabilities derives the worker's advertised capabilities from the
// DefaultCapabilities derives the worker's advertised capabilities from the
// embedded workload catalog, so an agent is workload-agnostic out of the box:
// it claims whatever enabled workloads the coordinator library declares.
// Explicit CAPABILITIES still overrides this for operators who want a subset.
func defaultCapabilities() []string {
func DefaultCapabilities() []string {
catalog, err := workloads.Load()
if err != nil {
return []string{"similarity-search"}
+17 -3
View File
@@ -8,6 +8,7 @@ import (
"io/fs"
"math"
"os"
"path/filepath"
"strconv"
"time"
@@ -82,6 +83,12 @@ type Config struct {
// On by default so a downloaded binary provisions its own database; set
// AUTO_MIGRATE=false when an operator manages migrations out of band.
AutoMigrate bool
// DatabaseEngine selects the storage backend: "sqlite" (embedded, the
// single-binary default) or "postgres" (cluster deployments). The
// postgres engine requires DATABASE_URL.
DatabaseEngine string
// DBPath is the sqlite database file (engine=sqlite only).
DBPath string
}
// Load reads the environment and fails fast on anything required-but-missing
@@ -128,8 +135,16 @@ func LoadConfig() (Config, error) {
WorkerOfflineAfter: 1 * time.Minute,
}
if cfg.DatabaseURL == "" {
return Config{}, fmt.Errorf("DATABASE_URL is required")
cfg.DatabaseEngine = getEnv("SCIMESH_DB", "sqlite")
switch cfg.DatabaseEngine {
case "sqlite", "postgres":
default:
return Config{}, fmt.Errorf("SCIMESH_DB must be sqlite or postgres")
}
cfg.DBPath = getEnv("SCIMESH_DB_PATH", filepath.Join(cfg.StorageDir, "scimesh.db"))
if cfg.DatabaseEngine == "postgres" && cfg.DatabaseURL == "" {
return Config{}, fmt.Errorf("DATABASE_URL is required for the postgres engine")
}
if cfg.UIToken != "" && cfg.Token != "" && cfg.UIToken == cfg.Token {
return Config{}, fmt.Errorf("UI_AUTH_TOKEN must differ from the worker auth token")
@@ -185,7 +200,6 @@ func LoadConfig() (Config, error) {
}
cfg.AutoMigrate = parsed
}
return cfg, nil
}
@@ -0,0 +1,91 @@
package sqlite
import (
"context"
"database/sql"
"errors"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/domain"
)
// ArtifactRepo implements usecase.ArtifactRepository on SQLite.
type ArtifactRepo struct {
db *sql.DB
}
func NewArtifactRepo(db *sql.DB) *ArtifactRepo {
return &ArtifactRepo{db: db}
}
const artifactColumns = `id, job_id, task_id, attempt, kind, filename, storage_key,
content_type, size_bytes, sha256, created_at`
// scanArtifact maps one row onto a domain.Artifact.
func scanArtifact(row interface{ Scan(dest ...any) error }) (*domain.Artifact, error) {
var (
a domain.Artifact
kind string
)
var (
taskID sql.NullString
attempt sql.NullInt64
createdAt sql.NullInt64
)
if err := row.Scan(
&a.ID, &a.JobID, &taskID, &attempt, &kind, &a.Filename, &a.StorageKey,
&a.ContentType, &a.SizeBytes, &a.SHA256, &createdAt,
); err != nil {
return nil, err
}
a.CreatedAt = decodeTime(createdAt.Int64)
a.Kind = domain.ArtifactKind(kind)
if taskID.Valid {
if id, err := uuid.Parse(taskID.String); err == nil {
a.TaskID = &id
}
}
if attempt.Valid {
value := int(attempt.Int64)
a.Attempt = &value
}
return &a, nil
}
func (r *ArtifactRepo) Insert(ctx context.Context, a *domain.Artifact) error {
_, err := conn(ctx, r.db).ExecContext(ctx, `
INSERT INTO artifacts (id, job_id, task_id, attempt, kind, filename, storage_key,
content_type, size_bytes, sha256, created_at)
VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)`,
a.ID.String(), a.JobID.String(), nullableUUID(a.TaskID), nullableInt(a.Attempt),
string(a.Kind), a.Filename, a.StorageKey, a.ContentType, a.SizeBytes, a.SHA256,
encodeTime(a.CreatedAt))
return err
}
func (r *ArtifactRepo) Get(ctx context.Context, id uuid.UUID) (*domain.Artifact, error) {
row := conn(ctx, r.db).QueryRowContext(ctx,
"SELECT "+artifactColumns+" FROM artifacts WHERE id = ?", id.String())
artifact, err := scanArtifact(row)
return artifact, mapErrNoRows(err, domain.ErrArtifactNotFound)
}
func (r *ArtifactRepo) FindPartialResult(ctx context.Context, taskID uuid.UUID, attempt int) (*domain.Artifact, error) {
row := conn(ctx, r.db).QueryRowContext(ctx,
"SELECT "+artifactColumns+" FROM artifacts WHERE task_id = ? AND attempt = ? AND kind = ?",
taskID.String(), attempt, string(domain.ArtifactPartialResult))
artifact, err := scanArtifact(row)
if errors.Is(err, sql.ErrNoRows) {
return nil, nil
}
return artifact, err
}
// nullableInt renders a nilable int as its value, or NULL.
func nullableInt(n *int) any {
if n == nil {
return nil
}
return *n
}
@@ -0,0 +1,168 @@
package sqlite
import (
"context"
"database/sql"
"time"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/domain"
)
// JobRepo implements usecase.JobRepository on SQLite.
type JobRepo struct {
db *sql.DB
}
func NewJobRepo(db *sql.DB) *JobRepo {
return &JobRepo{db: db}
}
const jobColumns = `id, workload, input_uri, parameters, status, created_at, completed_at,
input_artifact_id, result_artifact_id, error_code, error_message, reducer_started_at, owner_id`
// scanJob maps one row onto a domain.Job. Scanned values follow the sqlite
// column order exactly: ids are TEXT, parameters JSON TEXT, timestamps unix
// nanoseconds (nullable), statuses plain strings.
func scanJob(row interface{ Scan(dest ...any) error }) (*domain.Job, error) {
var (
j domain.Job
status string
params string
)
var (
createdAt sql.NullInt64
completedAt, reducerStartedAt sql.NullInt64
inputArtifact, resultArtifact, ownerID sql.NullString
errorCode, errorMessage sql.NullString
)
if err := row.Scan(
&j.ID, &j.Workload, &j.InputURI, &params, &status, &createdAt,
&completedAt, &inputArtifact, &resultArtifact, &errorCode, &errorMessage,
&reducerStartedAt, &ownerID,
); err != nil {
return nil, err
}
if err := decodeJSON(params, &j.Parameters); err != nil {
return nil, err
}
j.Status = domain.JobStatus(status)
j.CreatedAt = decodeTime(createdAt.Int64)
if completedAt.Valid {
value := decodeTime(completedAt.Int64)
j.CompletedAt = &value
}
if reducerStartedAt.Valid {
value := decodeTime(reducerStartedAt.Int64)
j.ReducerStartedAt = &value
}
if inputArtifact.Valid {
if id, err := uuid.Parse(inputArtifact.String); err == nil {
j.InputArtifactID = &id
}
}
if resultArtifact.Valid {
if id, err := uuid.Parse(resultArtifact.String); err == nil {
j.ResultArtifactID = &id
}
}
if ownerID.Valid {
if id, err := uuid.Parse(ownerID.String); err == nil {
j.OwnerID = &id
}
}
if errorCode.Valid {
j.ErrorCode = &errorCode.String
}
if errorMessage.Valid {
j.ErrorMessage = &errorMessage.String
}
return &j, nil
}
// Insert runs inside the caller's transaction alongside the job's tasks.
func (r *JobRepo) Insert(ctx context.Context, j *domain.Job) error {
_, err := conn(ctx, r.db).ExecContext(ctx, `
INSERT INTO jobs (id, workload, input_uri, parameters, status, created_at, owner_id)
VALUES (?, ?, ?, ?, ?, ?, ?)`,
j.ID.String(), j.Workload, j.InputURI, encodeJSON(j.Parameters), string(j.Status),
encodeTime(j.CreatedAt), nullableUUID(j.OwnerID))
return err
}
func (r *JobRepo) Get(ctx context.Context, id uuid.UUID) (*domain.Job, error) {
row := conn(ctx, r.db).QueryRowContext(ctx,
"SELECT "+jobColumns+" FROM jobs WHERE id = ?", id.String())
job, err := scanJob(row)
return job, mapErrNoRows(err, domain.ErrJobNotFound)
}
func (r *JobRepo) ClaimReduction(ctx context.Context, id uuid.UUID, startedAt time.Time) (bool, error) {
res, err := conn(ctx, r.db).ExecContext(ctx, `
UPDATE jobs SET reducer_started_at = ?
WHERE id = ? AND status = ? AND reducer_started_at IS NULL`,
encodeTime(startedAt), id.String(), string(domain.JobReducing))
if err != nil {
return false, err
}
affected, err := res.RowsAffected()
return affected == 1, err
}
func (r *JobRepo) CompleteWithResult(ctx context.Context, id, resultArtifactID uuid.UUID, completedAt time.Time) error {
res, err := conn(ctx, r.db).ExecContext(ctx, `
UPDATE jobs SET status = ?, result_artifact_id = ?, completed_at = ?,
reducer_started_at = NULL, error_code = NULL, error_message = NULL
WHERE id = ? AND status = ?`,
string(domain.JobCompleted), resultArtifactID.String(), encodeTime(completedAt),
id.String(), string(domain.JobReducing))
if err != nil {
return err
}
affected, err := res.RowsAffected()
if err != nil {
return err
}
if affected == 0 {
return domain.ErrJobNotFound
}
return nil
}
func (r *JobRepo) FailReduction(ctx context.Context, id uuid.UUID, code, message string, completedAt time.Time) error {
_, err := conn(ctx, r.db).ExecContext(ctx, `
UPDATE jobs SET status = ?, completed_at = ?, error_code = ?, error_message = ?,
reducer_started_at = NULL
WHERE id = ? AND status = ?`,
string(domain.JobFailed), encodeTime(completedAt), code, message,
id.String(), string(domain.JobReducing))
return err
}
func (r *JobRepo) UpdateStatus(ctx context.Context, id uuid.UUID,
status domain.JobStatus, completedAt *time.Time) error {
res, err := conn(ctx, r.db).ExecContext(ctx,
"UPDATE jobs SET status = ?, completed_at = ? WHERE id = ?",
string(status), encodeTimePtr(completedAt), id.String())
if err != nil {
return err
}
affected, err := res.RowsAffected()
if err != nil {
return err
}
if affected == 0 {
return domain.ErrJobNotFound
}
return nil
}
// nullableUUID renders a nilable UUID as its text, or NULL.
func nullableUUID(id *uuid.UUID) any {
if id == nil {
return nil
}
return id.String()
}
@@ -0,0 +1,85 @@
package sqlite
import (
"context"
"database/sql"
"embed"
"fmt"
"log/slog"
"regexp"
"sort"
"strconv"
)
//go:embed migrations/*.sql
var migrationFiles embed.FS
var migrationNamePattern = regexp.MustCompile(`^([0-9]+)_[a-z0-9_]+\.sql$`)
// Migrate applies every embedded migration above the current PRAGMA
// user_version watermark, each inside its own transaction. It is idempotent:
// the watermark only advances after a migration commits.
func Migrate(ctx context.Context, db *sql.DB, log *slog.Logger) error {
entries, err := migrationFiles.ReadDir("migrations")
if err != nil {
return fmt.Errorf("read embedded migrations: %w", err)
}
type file struct {
version int
name string
}
var files []file
byVersion := map[int]string{}
for _, entry := range entries {
match := migrationNamePattern.FindStringSubmatch(entry.Name())
if match == nil {
continue
}
version, err := strconv.Atoi(match[1])
if err != nil {
return fmt.Errorf("migration %q has an invalid version: %w", entry.Name(), err)
}
if _, duplicate := byVersion[version]; duplicate {
return fmt.Errorf("migration version %d is duplicated", version)
}
body, err := migrationFiles.ReadFile("migrations/" + entry.Name())
if err != nil {
return fmt.Errorf("read migration %q: %w", entry.Name(), err)
}
byVersion[version] = string(body)
files = append(files, file{version: version, name: entry.Name()})
}
if len(files) == 0 {
return fmt.Errorf("no sqlite migrations are embedded")
}
sort.Slice(files, func(i, j int) bool { return files[i].version < files[j].version })
var applied int
if err := db.QueryRowContext(ctx, "PRAGMA user_version").Scan(&applied); err != nil {
return fmt.Errorf("read schema version: %w", err)
}
for _, item := range files {
if item.version <= applied {
continue
}
if log != nil {
log.Info("applying sqlite migration", "version", item.version, "file", item.name)
}
tx, err := db.BeginTx(ctx, nil)
if err != nil {
return err
}
if _, err := tx.ExecContext(ctx, byVersion[item.version]); err != nil {
_ = tx.Rollback()
return fmt.Errorf("apply migration %s: %w", item.name, err)
}
if _, err := tx.ExecContext(ctx, fmt.Sprintf("PRAGMA user_version = %d", item.version)); err != nil {
_ = tx.Rollback()
return fmt.Errorf("advance schema version after %s: %w", item.name, err)
}
if err := tx.Commit(); err != nil {
return fmt.Errorf("commit migration %s: %w", item.name, err)
}
}
return nil
}
@@ -0,0 +1,96 @@
-- 0001: core schema. SQLite stores enums as TEXT with CHECK constraints and
-- JSON documents as TEXT; timestamps are unix nanoseconds (INTEGER).
CREATE TABLE IF NOT EXISTS jobs (
id TEXT PRIMARY KEY,
workload TEXT NOT NULL,
input_uri TEXT NOT NULL DEFAULT '',
parameters TEXT NOT NULL DEFAULT '{}',
status TEXT NOT NULL DEFAULT 'pending'
CHECK (status IN ('pending','running','reducing','completed','failed','cancelled')),
created_at INTEGER NOT NULL,
completed_at INTEGER,
input_artifact_id TEXT,
result_artifact_id TEXT,
error_code TEXT,
error_message TEXT,
reducer_started_at INTEGER,
owner_id TEXT
);
CREATE TABLE IF NOT EXISTS tasks (
id TEXT PRIMARY KEY,
job_id TEXT NOT NULL REFERENCES jobs(id) ON DELETE CASCADE,
chunk_index INTEGER NOT NULL,
workload TEXT NOT NULL,
input_uri TEXT,
input_artifact_id TEXT,
input_sha256 TEXT NOT NULL,
parameters TEXT NOT NULL DEFAULT '{}',
status TEXT NOT NULL DEFAULT 'pending'
CHECK (status IN ('pending','leased','running','completed','failed','cancelled')),
attempt INTEGER NOT NULL DEFAULT 0 CHECK (attempt >= 0),
max_attempts INTEGER NOT NULL DEFAULT 3 CHECK (max_attempts > 0),
lease_owner TEXT,
lease_expires_at INTEGER,
result_artifact_id TEXT,
metrics TEXT,
error_code TEXT,
error_message TEXT,
created_at INTEGER NOT NULL,
started_at INTEGER,
completed_at INTEGER,
version INTEGER NOT NULL DEFAULT 0,
CONSTRAINT uq_tasks_job_chunk UNIQUE (job_id, chunk_index),
CONSTRAINT ck_tasks_completed_result CHECK (
status <> 'completed' OR (result_artifact_id IS NOT NULL)
),
CONSTRAINT ck_tasks_leased_owner CHECK (
status <> 'leased' OR (lease_owner IS NOT NULL AND lease_expires_at IS NOT NULL)
)
);
CREATE INDEX IF NOT EXISTS ix_tasks_claim ON tasks (status, lease_expires_at, created_at);
CREATE INDEX IF NOT EXISTS ix_tasks_job ON tasks (job_id);
CREATE TABLE IF NOT EXISTS artifacts (
id TEXT PRIMARY KEY,
job_id TEXT NOT NULL REFERENCES jobs(id) ON DELETE CASCADE,
task_id TEXT,
attempt INTEGER,
kind TEXT NOT NULL
CHECK (kind IN ('input','shard','partial_result','final_result','log')),
filename TEXT NOT NULL,
storage_key TEXT NOT NULL,
content_type TEXT NOT NULL,
size_bytes INTEGER NOT NULL DEFAULT 0,
sha256 TEXT NOT NULL DEFAULT '',
created_at INTEGER NOT NULL,
CONSTRAINT uq_partial_result_task_attempt UNIQUE (task_id, attempt)
);
CREATE INDEX IF NOT EXISTS ix_artifacts_job ON artifacts (job_id);
CREATE TABLE IF NOT EXISTS workers (
id TEXT PRIMARY KEY,
name TEXT NOT NULL,
capabilities TEXT NOT NULL DEFAULT '[]',
status TEXT NOT NULL DEFAULT 'online'
CHECK (status IN ('online','busy','offline')),
owner_id TEXT,
trust_level TEXT NOT NULL DEFAULT 'trusted'
CHECK (trust_level IN ('trusted','untrusted')),
last_heartbeat_at INTEGER NOT NULL,
created_at INTEGER NOT NULL,
updated_at INTEGER NOT NULL
);
CREATE TABLE IF NOT EXISTS task_results (
task_id TEXT NOT NULL REFERENCES tasks(id) ON DELETE CASCADE,
owner_id TEXT NOT NULL,
result_sha256 TEXT NOT NULL,
result_artifact_id TEXT NOT NULL,
created_at INTEGER NOT NULL DEFAULT 0,
PRIMARY KEY (task_id, owner_id)
);
CREATE INDEX IF NOT EXISTS ix_task_results_task ON task_results (task_id);
@@ -0,0 +1,172 @@
// Package sqlite implements the usecase repository ports on an embedded
// SQLite database. It is the single-binary storage backend: no external
// service, one file per database, pure-Go driver (modernc.org/sqlite) so the
// static release binaries stay static.
//
// Concurrency model: SQLite allows exactly one writer. Every repository write
// runs inside a TxManager transaction, and the database is opened with a
// busy_timeout, so concurrent writers serialize instead of failing. The
// postgres claim path uses FOR UPDATE SKIP LOCKED; here the same guarantee
// comes from the write lock of the surrounding transaction — ClaimNext is
// always called inside WithinTx by the usecase layer, so SELECT + UPDATE
// cannot interleave.
package sqlite
import (
"context"
"database/sql"
"encoding/json"
"errors"
"fmt"
"time"
_ "modernc.org/sqlite"
"github.com/emil28092005/SciMesh/coordinator/internal/usecase"
)
// Open opens (and creates when missing) the database file, applying WAL,
// foreign keys, and a busy timeout. Callers own the returned handle.
func Open(path string) (*sql.DB, error) {
dsn := fmt.Sprintf("file:%s?_pragma=busy_timeout(10000)&_pragma=journal_mode(WAL)&_pragma=foreign_keys(1)&_pragma=synchronous(NORMAL)", path)
db, err := sql.Open("sqlite", dsn)
if err != nil {
return nil, fmt.Errorf("open sqlite database: %w", err)
}
if err := db.PingContext(context.Background()); err != nil {
_ = db.Close()
return nil, fmt.Errorf("ping sqlite database: %w", err)
}
return db, nil
}
// querier is satisfied by both *sql.DB and *sql.Tx, letting every repository
// method run identically inside or outside a transaction.
type querier interface {
ExecContext(ctx context.Context, query string, args ...any) (sql.Result, error)
QueryContext(ctx context.Context, query string, args ...any) (*sql.Rows, error)
QueryRowContext(ctx context.Context, query string, args ...any) *sql.Row
}
// txKey is an unexported struct type, so no other package can collide with it
// or reach the transaction we stash in the context.
type txKey struct{}
// TxManager implements usecase.TxManager.
type TxManager struct {
db *sql.DB
}
func NewTxManager(db *sql.DB) *TxManager {
return &TxManager{db: db}
}
var _ usecase.TxManager = (*TxManager)(nil)
// WithinTx runs fn inside one transaction, committing on success and rolling
// back on any error or panic. The transaction travels in the context, the
// same pattern as the postgres backend. SQLite write transactions are
// serialized by the database's single-writer lock, so a concurrent writer
// waits on the busy timeout instead of racing.
func (m *TxManager) WithinTx(ctx context.Context, fn func(ctx context.Context) error) error {
if _, ok := ctx.Value(txKey{}).(*sql.Tx); ok {
return fn(ctx)
}
tx, err := m.db.BeginTx(ctx, nil)
if err != nil {
return err
}
defer func() { _ = tx.Rollback() }()
if err := fn(context.WithValue(ctx, txKey{}, tx)); err != nil {
return err
}
return tx.Commit()
}
// conn returns the transaction bound to ctx, or the database when there is none.
func conn(ctx context.Context, db *sql.DB) querier {
if tx, ok := ctx.Value(txKey{}).(*sql.Tx); ok {
return tx
}
return db
}
// --- JSON and null helpers ------------------------------------------------
// encodeJSON stores a Go value as JSON text, defaulting to "{}".
func encodeJSON(value any) string {
if value == nil {
return "{}"
}
encoded, err := json.Marshal(value)
if err != nil {
return "{}"
}
return string(encoded)
}
// decodeJSON reads a JSON text column into the destination.
func decodeJSON(raw any, destination any) error {
text, ok := raw.(string)
if !ok {
return nil
}
if text == "" {
return nil
}
return json.Unmarshal([]byte(text), destination)
}
// encodeTime stores a time as unix nanoseconds (NULL for zero time).
func encodeTime(t time.Time) any {
if t.IsZero() {
return nil
}
return t.UnixNano()
}
// encodeTimePtr stores a nilable time as unix nanoseconds.
func encodeTimePtr(t *time.Time) any {
if t == nil {
return nil
}
return t.UnixNano()
}
// decodeTime reads a unix-nanosecond column back into a time.Time.
func decodeTime(raw any) time.Time {
switch v := raw.(type) {
case int64:
return time.Unix(0, v).UTC()
case int:
return time.Unix(0, int64(v)).UTC()
}
return time.Time{}
}
// nullIfEmpty maps "" to SQL NULL.
func nullIfEmpty(s string) any {
if s == "" {
return nil
}
return s
}
// mapErrNoRows translates sql.ErrNoRows into the domain not-found errors.
func mapErrNoRows(err error, notFound error) error {
if errors.Is(err, sql.ErrNoRows) {
return notFound
}
return err
}
var (
_ usecase.JobRepository = (*JobRepo)(nil)
_ usecase.TaskRepository = (*TaskRepo)(nil)
_ usecase.ArtifactRepository = (*ArtifactRepo)(nil)
_ usecase.WorkerRepository = (*WorkerRepo)(nil)
_ usecase.TaskResultRepository = (*TaskResultRepo)(nil)
_ usecase.UIReadRepository = (*UIReadRepo)(nil)
_ usecase.TxManager = (*TxManager)(nil)
)
@@ -0,0 +1,349 @@
package sqlite
import (
"context"
"database/sql"
"errors"
"path/filepath"
"testing"
"time"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/domain"
"github.com/emil28092005/SciMesh/coordinator/internal/usecase"
)
// newTestDB opens an isolated on-disk database and applies the migrations.
func newTestDB(t *testing.T) *sql.DB {
t.Helper()
db, err := Open(filepath.Join(t.TempDir(), "test.db"))
if err != nil {
t.Fatalf("open: %v", err)
}
t.Cleanup(func() { _ = db.Close() })
if err := Migrate(context.Background(), db, nil); err != nil {
t.Fatalf("migrate: %v", err)
}
return db
}
func fixedTime() time.Time {
return time.Date(2026, 8, 2, 12, 0, 0, 0, time.UTC)
}
func seedJob(t *testing.T, db *sql.DB, n int) *domain.Job {
t.Helper()
ctx := context.Background()
tx := NewTxManager(db)
chunks := make([]domain.ChunkSpec, 0, n)
for i := 0; i < n; i++ {
chunks = append(chunks, domain.ChunkSpec{
ChunkIndex: i,
InputURI: "s3://chunk-" + string(rune('a'+i)),
InputSHA256: "sha-" + string(rune('a'+i)),
})
}
job, tasks, err := domain.NewJobWithTasks("similarity_search", "s3://ds", nil, chunks, fixedTime())
if err != nil {
t.Fatal(err)
}
if err := tx.WithinTx(ctx, func(ctx context.Context) error {
if err := NewJobRepo(db).Insert(ctx, job); err != nil {
return err
}
return NewTaskRepo(db).InsertBatch(ctx, tasks)
}); err != nil {
t.Fatalf("seed: %v", err)
}
return job
}
func TestMigrateIsIdempotent(t *testing.T) {
db := newTestDB(t)
ctx := context.Background()
if err := Migrate(ctx, db, nil); err != nil {
t.Fatalf("second migrate: %v", err)
}
var version int
if err := db.QueryRowContext(ctx, "PRAGMA user_version").Scan(&version); err != nil {
t.Fatal(err)
}
if version != 1 {
t.Errorf("user_version = %d, want 1", version)
}
}
func TestJobRepoRoundTrip(t *testing.T) {
db := newTestDB(t)
ctx := context.Background()
job := seedJob(t, db, 1)
got, err := NewJobRepo(db).Get(ctx, job.ID)
if err != nil {
t.Fatal(err)
}
if got.Workload != job.Workload || got.Status != domain.JobPending {
t.Errorf("job = %+v", got)
}
if err := NewJobRepo(db).UpdateStatus(ctx, job.ID, domain.JobRunning, nil); err != nil {
t.Fatal(err)
}
got, err = NewJobRepo(db).Get(ctx, job.ID)
if err != nil {
t.Fatal(err)
}
if got.Status != domain.JobRunning {
t.Errorf("status = %q, want running", got.Status)
}
if _, err := NewJobRepo(db).Get(ctx, uuid.New()); !errors.Is(err, domain.ErrJobNotFound) {
t.Errorf("missing job err = %v, want ErrJobNotFound", err)
}
}
func TestClaimGivesEachTaskToExactlyOneWorker(t *testing.T) {
db := newTestDB(t)
ctx := context.Background()
seedJob(t, db, 3)
repo := NewTaskRepo(db)
claimed := map[uuid.UUID]bool{}
for i := 0; i < 3; i++ {
task, err := repo.ClaimNext(ctx, usecase.ClaimFilter{
Workloads: []string{"similarity_search"},
Owner: "w1",
Now: fixedTime(),
LeaseUntil: fixedTime().Add(time.Minute),
})
if err != nil {
t.Fatal(err)
}
if task == nil {
t.Fatal("claim returned nil on a non-empty queue")
}
if claimed[task.ID] {
t.Fatalf("task %s claimed twice", task.ID)
}
claimed[task.ID] = true
if task.Status != domain.TaskLeased || task.Attempt != 1 || task.LeaseOwner == nil || *task.LeaseOwner != "w1" {
t.Errorf("task = %+v", task)
}
}
task, err := repo.ClaimNext(ctx, usecase.ClaimFilter{Workloads: []string{"similarity_search"}, Owner: "w1", Now: fixedTime(), LeaseUntil: fixedTime().Add(time.Minute)})
if err != nil {
t.Fatal(err)
}
if task != nil {
t.Fatal("claim must return nil on an empty queue")
}
}
func TestUpdateRejectsStaleVersion(t *testing.T) {
db := newTestDB(t)
ctx := context.Background()
seedJob(t, db, 1)
repo := NewTaskRepo(db)
task, err := repo.ClaimNext(ctx, usecase.ClaimFilter{Workloads: nil, Owner: "w1", Now: fixedTime(), LeaseUntil: fixedTime().Add(time.Minute)})
if err != nil || task == nil {
t.Fatalf("claim: %v", err)
}
stale := *task
task.Status = domain.TaskRunning
task.Version++ // as a domain method would have done
if err := repo.Update(ctx, task); err != nil {
t.Fatal(err)
}
stale.Status = domain.TaskCompleted
stale.Version++
if err := repo.Update(ctx, &stale); !errors.Is(err, domain.ErrLeaseConflict) {
t.Errorf("stale update err = %v, want ErrLeaseConflict", err)
}
}
func TestExpireLeasesRequeuesElapsedTasks(t *testing.T) {
db := newTestDB(t)
ctx := context.Background()
seedJob(t, db, 1)
repo := NewTaskRepo(db)
task, err := repo.ClaimNext(ctx, usecase.ClaimFilter{Workloads: nil, Owner: "w1", Now: fixedTime(), LeaseUntil: fixedTime().Add(-time.Minute)})
if err != nil || task == nil {
t.Fatalf("claim: %v", err)
}
affected, err := repo.ExpireLeases(ctx, fixedTime())
if err != nil {
t.Fatal(err)
}
if len(affected) != 1 {
t.Fatalf("affected = %v, want 1 job", affected)
}
task, err = repo.ClaimNext(ctx, usecase.ClaimFilter{Workloads: nil, Owner: "w2", Now: fixedTime(), LeaseUntil: fixedTime().Add(time.Minute)})
if err != nil {
t.Fatal(err)
}
if task == nil || task.Attempt != 2 {
t.Errorf("requeued task = %+v, want attempt 2", task)
}
}
func TestExpireLeasesFailsAfterFinalAttempt(t *testing.T) {
db := newTestDB(t)
ctx := context.Background()
seedJob(t, db, 1)
repo := NewTaskRepo(db)
for attempt := 1; attempt <= 3; attempt++ {
task, err := repo.ClaimNext(ctx, usecase.ClaimFilter{Workloads: nil, Owner: "w1", Now: fixedTime(), LeaseUntil: fixedTime().Add(-time.Minute)})
if err != nil || task == nil {
t.Fatalf("claim %d: %v", attempt, err)
}
if _, err := repo.ExpireLeases(ctx, fixedTime()); err != nil {
t.Fatal(err)
}
}
task, err := repo.ClaimNext(ctx, usecase.ClaimFilter{Workloads: nil, Owner: "w1", Now: fixedTime(), LeaseUntil: fixedTime().Add(time.Minute)})
if err != nil {
t.Fatal(err)
}
if task != nil {
t.Fatal("exhausted task must not be claimable")
}
}
func TestArtifactRepoRoundTripAndUniqueness(t *testing.T) {
db := newTestDB(t)
ctx := context.Background()
job := seedJob(t, db, 1)
repo := NewArtifactRepo(db)
attempt := 1
artifact, err := domain.NewArtifact(job.ID, nil, domain.ArtifactShard, "shard-0.tsv", "text/tab-separated-values", fixedTime())
if err != nil {
t.Fatal(err)
}
artifact.SetContent("abc123", 42)
if err := repo.Insert(ctx, artifact); err != nil {
t.Fatal(err)
}
got, err := repo.Get(ctx, artifact.ID)
if err != nil {
t.Fatal(err)
}
if got.SHA256 != "abc123" || got.SizeBytes != 42 {
t.Errorf("artifact = %+v", got)
}
partialTask := uuid.New()
partial, err := domain.NewArtifact(job.ID, &partialTask, domain.ArtifactPartialResult, "p.csv", "text/csv", fixedTime())
if err != nil {
t.Fatal(err)
}
partial.Attempt = &attempt
if err := repo.Insert(ctx, partial); err != nil {
t.Fatal(err)
}
found, err := repo.FindPartialResult(ctx, partialTask, attempt)
if err != nil || found == nil {
t.Fatalf("find partial: %v", err)
}
duplicate, err := domain.NewArtifact(job.ID, &partialTask, domain.ArtifactPartialResult, "p2.csv", "text/csv", fixedTime())
if err != nil {
t.Fatal(err)
}
duplicate.Attempt = &attempt
if err := repo.Insert(ctx, duplicate); err == nil {
t.Fatal("duplicate partial for the same attempt must fail")
}
}
func TestWorkerRepoRoundTripAndLiveness(t *testing.T) {
db := newTestDB(t)
ctx := context.Background()
repo := NewWorkerRepo(db)
worker, err := domain.NewWorker("w1", []string{"similarity-search"}, fixedTime())
if err != nil {
t.Fatal(err)
}
if err := repo.Insert(ctx, worker); err != nil {
t.Fatal(err)
}
got, err := repo.Get(ctx, worker.ID)
if err != nil {
t.Fatal(err)
}
if got.Name != "w1" || len(got.Capabilities) != 1 || got.TrustLevel != domain.WorkerTrusted {
t.Errorf("worker = %+v", got)
}
if err := repo.Touch(ctx, worker.ID, fixedTime().Add(time.Hour)); err != nil {
t.Fatal(err)
}
changed, err := repo.MarkStaleOffline(ctx, fixedTime().Add(2*time.Hour))
if err != nil {
t.Fatal(err)
}
if changed != 1 {
t.Errorf("offline changes = %d, want 1", changed)
}
got, err = repo.Get(ctx, worker.ID)
if err != nil {
t.Fatal(err)
}
if got.Status != domain.WorkerOffline {
t.Errorf("status = %q, want offline", got.Status)
}
}
func TestTaskResultVotes(t *testing.T) {
db := newTestDB(t)
ctx := context.Background()
job := seedJob(t, db, 1)
repo := NewTaskResultRepo(db)
task, err := domain.NewTask(job.ID, 1, "similarity_search", "s3://in", "sha", nil, 3, fixedTime())
if err != nil {
t.Fatal(err)
}
if err := NewTaskRepo(db).InsertBatch(ctx, []*domain.Task{task}); err != nil {
t.Fatal(err)
}
taskID := task.ID
artifactID := uuid.New()
ownerA, ownerB := uuid.New(), uuid.New()
if err := repo.RecordVote(ctx, taskID, ownerA, "hash", artifactID); err != nil {
t.Fatal(err)
}
if err := repo.RecordVote(ctx, taskID, ownerB, "hash", artifactID); err != nil {
t.Fatal(err)
}
if err := repo.RecordVote(ctx, taskID, ownerA, "hash2", artifactID); err != nil {
t.Fatal(err)
}
n, err := repo.CountAgreeing(ctx, taskID, "hash")
if err != nil {
t.Fatal(err)
}
if n != 1 {
t.Errorf("agreeing = %d, want 1 (owner A changed its vote)", n)
}
}
func TestCancelByJobInvalidatesTasks(t *testing.T) {
db := newTestDB(t)
ctx := context.Background()
job := seedJob(t, db, 2)
repo := NewTaskRepo(db)
task, err := repo.ClaimNext(ctx, usecase.ClaimFilter{Workloads: nil, Owner: "w1", Now: fixedTime(), LeaseUntil: fixedTime().Add(time.Minute)})
if err != nil || task == nil {
t.Fatalf("claim: %v", err)
}
cancelled, err := repo.CancelByJob(ctx, job.ID, fixedTime())
if err != nil {
t.Fatal(err)
}
if cancelled != 2 {
t.Errorf("cancelled = %d, want 2", cancelled)
}
got, err := repo.Get(ctx, task.ID)
if err != nil {
t.Fatal(err)
}
if got.Status != domain.TaskCancelled || got.LeaseOwner != nil {
t.Errorf("cancelled task = %+v", got)
}
}
@@ -0,0 +1,63 @@
package sqlite
import (
"context"
"database/sql"
"fmt"
"github.com/emil28092005/SciMesh/coordinator/internal/domain"
)
// Known statuses per entity, so counts are zero-filled and every status is
// always present in the metrics (a flat 0 line beats a gap on the dashboard).
var (
taskStatuses = []string{string(domain.TaskPending), string(domain.TaskLeased), string(domain.TaskRunning), string(domain.TaskCompleted), string(domain.TaskFailed), string(domain.TaskCancelled)}
jobStatuses = []string{string(domain.JobPending), string(domain.JobRunning), string(domain.JobReducing), string(domain.JobCompleted), string(domain.JobFailed), string(domain.JobCancelled)}
workerStatuses = []string{string(domain.WorkerOnline), string(domain.WorkerBusy), string(domain.WorkerOffline)}
)
// StatsRepo answers the aggregate status counts the business metrics report.
type StatsRepo struct {
db *sql.DB
}
func NewStatsRepo(db *sql.DB) *StatsRepo {
return &StatsRepo{db: db}
}
// Counts returns status->count maps for tasks, jobs, and workers, each
// zero-filled across its known statuses.
func (r *StatsRepo) Counts(ctx context.Context) (tasks, jobs, workers map[string]int, err error) {
if tasks, err = r.countByStatus(ctx, "tasks", taskStatuses); err != nil {
return nil, nil, nil, err
}
if jobs, err = r.countByStatus(ctx, "jobs", jobStatuses); err != nil {
return nil, nil, nil, err
}
if workers, err = r.countByStatus(ctx, "workers", workerStatuses); err != nil {
return nil, nil, nil, err
}
return tasks, jobs, workers, nil
}
func (r *StatsRepo) countByStatus(ctx context.Context, table string, known []string) (map[string]int, error) {
out := make(map[string]int, len(known))
for _, s := range known {
out[s] = 0 // zero-fill
}
// table is a fixed internal constant, never user input — safe to format.
rows, err := r.db.QueryContext(ctx, fmt.Sprintf("SELECT status, count(*) FROM %s GROUP BY status", table))
if err != nil {
return nil, fmt.Errorf("count %s by status: %w", table, err)
}
defer func() { _ = rows.Close() }()
for rows.Next() {
var status string
var n int
if err := rows.Scan(&status, &n); err != nil {
return nil, err
}
out[status] = n
}
return out, rows.Err()
}
@@ -0,0 +1,314 @@
package sqlite
import (
"context"
"database/sql"
"errors"
"strings"
"time"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/domain"
"github.com/emil28092005/SciMesh/coordinator/internal/usecase"
)
// TaskRepo implements usecase.TaskRepository on SQLite.
type TaskRepo struct {
db *sql.DB
}
func NewTaskRepo(db *sql.DB) *TaskRepo {
return &TaskRepo{db: db}
}
const taskColumns = `id, job_id, chunk_index, workload, input_uri, input_artifact_id, input_sha256,
parameters, status, attempt, max_attempts, lease_owner, lease_expires_at,
result_artifact_id, metrics, error_code, error_message,
created_at, started_at, completed_at, version`
// scanTask maps one row onto a domain.Task.
func scanTask(row interface{ Scan(dest ...any) error }) (*domain.Task, error) {
var (
t domain.Task
status string
params string
metrics sql.NullString
)
var (
inputURI, leaseOwner, errorCode, errorMessage sql.NullString
inputArtifact, resultArtifact sql.NullString
leaseExpiresAt, startedAt, completedAt sql.NullInt64
createdAt sql.NullInt64
)
if err := row.Scan(
&t.ID, &t.JobID, &t.ChunkIndex, &t.Workload, &inputURI, &inputArtifact, &t.InputSHA256,
&params, &status, &t.Attempt, &t.MaxAttempts, &leaseOwner, &leaseExpiresAt,
&resultArtifact, &metrics, &errorCode, &errorMessage,
&createdAt, &startedAt, &completedAt, &t.Version,
); err != nil {
return nil, err
}
if err := decodeJSON(params, &t.Parameters); err != nil {
return nil, err
}
if metrics.Valid && metrics.String != "" {
if err := decodeJSON(metrics.String, &t.Metrics); err != nil {
return nil, err
}
}
t.Status = domain.TaskStatus(status)
t.CreatedAt = decodeTime(createdAt.Int64)
if inputURI.Valid {
t.InputURI = inputURI.String
}
if leaseOwner.Valid {
t.LeaseOwner = &leaseOwner.String
}
if inputArtifact.Valid {
if id, err := uuid.Parse(inputArtifact.String); err == nil {
t.InputArtifactID = &id
}
}
if resultArtifact.Valid {
if id, err := uuid.Parse(resultArtifact.String); err == nil {
t.ResultArtifactID = &id
}
}
if leaseExpiresAt.Valid {
value := decodeTime(leaseExpiresAt.Int64)
t.LeaseExpiresAt = &value
}
if startedAt.Valid {
value := decodeTime(startedAt.Int64)
t.StartedAt = &value
}
if completedAt.Valid {
value := decodeTime(completedAt.Int64)
t.CompletedAt = &value
}
if errorCode.Valid {
t.ErrorCode = &errorCode.String
}
if errorMessage.Valid {
t.ErrorMessage = &errorMessage.String
}
return &t, nil
}
// ClaimNext atomically leases the next eligible task. SQLite has no SKIP
// LOCKED: the guarantee comes from the surrounding transaction's write lock —
// the usecase layer always calls ClaimNext inside WithinTx, so SELECT + UPDATE
// cannot interleave with another claimant.
func (r *TaskRepo) ClaimNext(ctx context.Context, f usecase.ClaimFilter) (*domain.Task, error) {
workloadClause := ""
workloadArgs := []any{}
if len(f.Workloads) > 0 {
placeholders := make([]string, 0, len(f.Workloads))
for _, w := range f.Workloads {
placeholders = append(placeholders, "?")
workloadArgs = append(workloadArgs, w)
}
workloadClause = " AND workload IN (" + strings.Join(placeholders, ", ") + ")"
}
voterClause := ""
var voterArg any
if f.VoterOwner != nil {
voterClause = " AND NOT EXISTS (SELECT 1 FROM task_results tr WHERE tr.task_id = tasks.id AND tr.owner_id = ?)"
voterArg = f.VoterOwner.String()
}
args := append([]any{f.Owner, f.LeaseUntil.UnixNano(), f.Now.UnixNano()}, workloadArgs...)
if f.VoterOwner != nil {
args = append(args, voterArg)
}
query := `
UPDATE tasks SET
status = 'leased',
attempt = attempt + 1,
lease_owner = ?,
lease_expires_at = ?,
started_at = COALESCE(started_at, ?),
version = version + 1
WHERE id IN (
SELECT id FROM tasks
WHERE status = 'pending' AND attempt < max_attempts` + workloadClause + voterClause + `
ORDER BY created_at, chunk_index
LIMIT 1
)
RETURNING ` + taskColumns
row := conn(ctx, r.db).QueryRowContext(ctx, query, args...)
task, err := scanTask(row)
if errors.Is(err, sql.ErrNoRows) {
return nil, nil
}
if err != nil {
return nil, err
}
return task, nil
}
func (r *TaskRepo) Get(ctx context.Context, id uuid.UUID) (*domain.Task, error) {
row := conn(ctx, r.db).QueryRowContext(ctx,
"SELECT "+taskColumns+" FROM tasks WHERE id = ?", id.String())
task, err := scanTask(row)
return task, mapErrNoRows(err, domain.ErrTaskNotFound)
}
// GetForUpdate reads a task. SQLite serializes writers inside a transaction,
// so no row lock is needed: the surrounding write transaction already isolates
// the read-modify-write sequence.
func (r *TaskRepo) GetForUpdate(ctx context.Context, id uuid.UUID) (*domain.Task, error) {
return r.Get(ctx, id)
}
// Update writes the mutated entity back under optimistic concurrency.
func (r *TaskRepo) Update(ctx context.Context, t *domain.Task) error {
res, err := conn(ctx, r.db).ExecContext(ctx, `
UPDATE tasks SET
status = ?, attempt = ?, lease_owner = ?, lease_expires_at = ?,
result_artifact_id = ?, metrics = ?, error_code = ?, error_message = ?,
started_at = ?, completed_at = ?, version = ?
WHERE id = ? AND version = ?`,
string(t.Status), t.Attempt, nullableString(t.LeaseOwner), encodeTimePtr(t.LeaseExpiresAt),
nullableUUID(t.ResultArtifactID), nullableMetrics(t.Metrics),
nullableString(t.ErrorCode), nullableString(t.ErrorMessage),
encodeTimePtr(t.StartedAt), encodeTimePtr(t.CompletedAt), t.Version,
t.ID.String(), t.Version-1)
if err != nil {
return err
}
affected, err := res.RowsAffected()
if err != nil {
return err
}
if affected == 0 {
return domain.ErrLeaseConflict
}
return nil
}
func (r *TaskRepo) InsertBatch(ctx context.Context, tasks []*domain.Task) error {
for _, t := range tasks {
_, err := conn(ctx, r.db).ExecContext(ctx, `
INSERT INTO tasks (id, job_id, chunk_index, workload, input_uri, input_artifact_id,
input_sha256, parameters, status, attempt, max_attempts, created_at, version)
VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)`,
t.ID.String(), t.JobID.String(), t.ChunkIndex, t.Workload,
nullIfEmpty(t.InputURI), nullableUUID(t.InputArtifactID),
t.InputSHA256, encodeJSON(t.Parameters), string(t.Status),
t.Attempt, t.MaxAttempts, encodeTime(t.CreatedAt), t.Version)
if err != nil {
return err
}
}
return nil
}
func (r *TaskRepo) ListCompleted(ctx context.Context, jobID uuid.UUID) ([]*domain.Task, error) {
rows, err := conn(ctx, r.db).QueryContext(ctx,
"SELECT "+taskColumns+" FROM tasks WHERE job_id = ? AND status = ? ORDER BY chunk_index",
jobID.String(), string(domain.TaskCompleted))
if err != nil {
return nil, err
}
defer func() { _ = rows.Close() }()
var tasks []*domain.Task
for rows.Next() {
task, err := scanTask(rows)
if err != nil {
return nil, err
}
tasks = append(tasks, task)
}
return tasks, rows.Err()
}
func (r *TaskRepo) CountByStatus(ctx context.Context, jobID uuid.UUID) (map[domain.TaskStatus]int, error) {
rows, err := conn(ctx, r.db).QueryContext(ctx,
"SELECT status, count(*) FROM tasks WHERE job_id = ? GROUP BY status", jobID.String())
if err != nil {
return nil, err
}
defer func() { _ = rows.Close() }()
counts := make(map[domain.TaskStatus]int)
for rows.Next() {
var (
status string
n int
)
if err := rows.Scan(&status, &n); err != nil {
return nil, err
}
counts[domain.TaskStatus(status)] = n
}
return counts, rows.Err()
}
func (r *TaskRepo) CancelByJob(ctx context.Context, jobID uuid.UUID, now time.Time) (int64, error) {
res, err := conn(ctx, r.db).ExecContext(ctx, `
UPDATE tasks SET
status = 'cancelled',
lease_owner = NULL,
lease_expires_at = NULL,
error_code = NULL,
error_message = NULL,
completed_at = ?,
version = version + 1
WHERE job_id = ? AND status IN ('pending','leased','running')`,
now.UnixNano(), jobID.String())
if err != nil {
return 0, err
}
return res.RowsAffected()
}
// ExpireLeases applies the lease-expiry rule set-based and returns the
// distinct jobs whose aggregate status may have changed.
func (r *TaskRepo) ExpireLeases(ctx context.Context, now time.Time) ([]uuid.UUID, error) {
rows, err := conn(ctx, r.db).QueryContext(ctx, `
UPDATE tasks SET
status = CASE WHEN attempt < max_attempts THEN 'pending' ELSE 'failed' END,
lease_owner = NULL,
lease_expires_at = NULL,
error_code = CASE WHEN attempt >= max_attempts THEN ? ELSE error_code END,
error_message = CASE WHEN attempt >= max_attempts THEN ? ELSE error_message END,
completed_at = CASE WHEN attempt >= max_attempts THEN ? ELSE completed_at END,
version = version + 1
WHERE status IN ('leased','running') AND lease_expires_at < ?
RETURNING job_id`,
domain.ErrCodeLeaseExpired, "lease expired after the final attempt", now.UnixNano(), now.UnixNano())
if err != nil {
return nil, err
}
defer func() { _ = rows.Close() }()
var affected []uuid.UUID
seen := map[uuid.UUID]bool{}
for rows.Next() {
var raw string
if err := rows.Scan(&raw); err != nil {
return nil, err
}
if id, err := uuid.Parse(raw); err == nil && !seen[id] {
seen[id] = true
affected = append(affected, id)
}
}
return affected, rows.Err()
}
// nullableString renders a nilable string, or NULL.
func nullableString(s *string) any {
if s == nil {
return nil
}
return *s
}
// nullableMetrics stores nil metrics as NULL, else JSON text.
func nullableMetrics(m map[string]any) any {
if m == nil {
return nil
}
return encodeJSON(m)
}
@@ -0,0 +1,41 @@
package sqlite
import (
"context"
"database/sql"
"time"
"github.com/google/uuid"
)
// TaskResultRepo records and tallies quorum votes for untrusted task results.
type TaskResultRepo struct {
db *sql.DB
}
func NewTaskResultRepo(db *sql.DB) *TaskResultRepo {
return &TaskResultRepo{db: db}
}
// RecordVote stores (or replaces) one owner's vote for a task's result.
func (r *TaskResultRepo) RecordVote(ctx context.Context, taskID, ownerID uuid.UUID, sha256 string, artifactID uuid.UUID) error {
_, err := conn(ctx, r.db).ExecContext(ctx, `
INSERT INTO task_results (task_id, owner_id, result_sha256, result_artifact_id, created_at)
VALUES (?, ?, ?, ?, ?)
ON CONFLICT (task_id, owner_id) DO UPDATE SET
result_sha256 = excluded.result_sha256,
result_artifact_id = excluded.result_artifact_id,
created_at = excluded.created_at`,
taskID.String(), ownerID.String(), sha256, artifactID.String(), time.Now().UnixNano())
return err
}
// CountAgreeing returns how many distinct owners have voted for the given
// result hash on this task.
func (r *TaskResultRepo) CountAgreeing(ctx context.Context, taskID uuid.UUID, sha256 string) (int, error) {
var n int
err := conn(ctx, r.db).QueryRowContext(ctx,
"SELECT count(DISTINCT owner_id) FROM task_results WHERE task_id = ? AND result_sha256 = ?",
taskID.String(), sha256).Scan(&n)
return n, err
}
@@ -0,0 +1,145 @@
package sqlite
import (
"context"
"database/sql"
"fmt"
"strings"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/domain"
)
// UIReadRepo contains bounded, deterministic read queries for the operator UI.
type UIReadRepo struct{ db *sql.DB }
func NewUIReadRepo(db *sql.DB) *UIReadRepo { return &UIReadRepo{db: db} }
func (r *UIReadRepo) GetJob(ctx context.Context, id uuid.UUID) (*domain.Job, error) {
return NewJobRepo(r.db).Get(ctx, id)
}
func (r *UIReadRepo) ListJobs(ctx context.Context, owner *uuid.UUID, limit int) ([]domain.Job, error) {
if limit < 1 || limit > 100 {
return nil, domain.ErrInvalidInput
}
query := "SELECT " + jobColumns + " FROM jobs"
args := []any{}
if owner != nil {
query += " WHERE owner_id = ?"
args = append(args, owner.String())
}
query += " ORDER BY created_at DESC, id DESC LIMIT ?"
args = append(args, limit)
rows, err := conn(ctx, r.db).QueryContext(ctx, query, args...)
if err != nil {
return nil, fmt.Errorf("list jobs: %w", err)
}
defer func() { _ = rows.Close() }()
jobs := make([]domain.Job, 0)
for rows.Next() {
job, err := scanJob(rows)
if err != nil {
return nil, err
}
jobs = append(jobs, *job)
}
return jobs, rows.Err()
}
func (r *UIReadRepo) ListTasksByJob(ctx context.Context, jobID uuid.UUID) ([]domain.Task, error) {
rows, err := conn(ctx, r.db).QueryContext(ctx,
"SELECT "+taskColumns+" FROM tasks WHERE job_id = ? ORDER BY chunk_index ASC", jobID.String())
if err != nil {
return nil, fmt.Errorf("list tasks: %w", err)
}
defer func() { _ = rows.Close() }()
tasks := make([]domain.Task, 0)
for rows.Next() {
task, err := scanTask(rows)
if err != nil {
return nil, err
}
tasks = append(tasks, *task)
}
return tasks, rows.Err()
}
func (r *UIReadRepo) ListTasksByJobs(ctx context.Context, jobIDs []uuid.UUID) (map[uuid.UUID][]domain.Task, error) {
out := make(map[uuid.UUID][]domain.Task, len(jobIDs))
if len(jobIDs) == 0 {
return out, nil
}
placeholders := make([]string, 0, len(jobIDs))
args := make([]any, 0, len(jobIDs))
for _, id := range jobIDs {
placeholders = append(placeholders, "?")
args = append(args, id.String())
}
rows, err := conn(ctx, r.db).QueryContext(ctx,
"SELECT "+taskColumns+" FROM tasks WHERE job_id IN ("+strings.Join(placeholders, ", ")+") ORDER BY job_id ASC, chunk_index ASC",
args...)
if err != nil {
return nil, fmt.Errorf("list tasks by jobs: %w", err)
}
defer func() { _ = rows.Close() }()
for rows.Next() {
task, err := scanTask(rows)
if err != nil {
return nil, err
}
out[task.JobID] = append(out[task.JobID], *task)
}
return out, rows.Err()
}
func (r *UIReadRepo) ListWorkers(ctx context.Context, limit int) ([]domain.Worker, error) {
return r.listWorkers(ctx, "", nil, limit)
}
func (r *UIReadRepo) ListWorkersByOwner(ctx context.Context, owner uuid.UUID, limit int) ([]domain.Worker, error) {
return r.listWorkers(ctx, " WHERE owner_id = ?", []any{owner.String()}, limit)
}
func (r *UIReadRepo) listWorkers(ctx context.Context, clause string, args []any, limit int) ([]domain.Worker, error) {
if limit < 1 || limit > 100 {
return nil, domain.ErrInvalidInput
}
query := "SELECT " + workerColumns + " FROM workers" + clause +
" ORDER BY last_heartbeat_at DESC, id DESC LIMIT ?"
fullArgs := append(args, limit)
rows, err := conn(ctx, r.db).QueryContext(ctx, query, fullArgs...)
if err != nil {
return nil, fmt.Errorf("list workers: %w", err)
}
defer func() { _ = rows.Close() }()
workers := make([]domain.Worker, 0)
for rows.Next() {
worker, err := scanWorker(rows)
if err != nil {
return nil, err
}
workers = append(workers, *worker)
}
return workers, rows.Err()
}
func (r *UIReadRepo) ListArtifactsByJob(ctx context.Context, jobID uuid.UUID) ([]domain.Artifact, error) {
rows, err := conn(ctx, r.db).QueryContext(ctx,
"SELECT "+artifactColumns+" FROM artifacts WHERE job_id = ? ORDER BY created_at ASC, id ASC",
jobID.String())
if err != nil {
return nil, fmt.Errorf("list artifacts: %w", err)
}
defer func() { _ = rows.Close() }()
artifacts := make([]domain.Artifact, 0)
for rows.Next() {
artifact, err := scanArtifact(rows)
if err != nil {
return nil, err
}
artifacts = append(artifacts, *artifact)
}
return artifacts, rows.Err()
}
@@ -0,0 +1,92 @@
package sqlite
import (
"context"
"database/sql"
"time"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/domain"
)
// WorkerRepo implements usecase.WorkerRepository on SQLite.
type WorkerRepo struct {
db *sql.DB
}
func NewWorkerRepo(db *sql.DB) *WorkerRepo {
return &WorkerRepo{db: db}
}
const workerColumns = `id, name, capabilities, status, owner_id, trust_level, last_heartbeat_at, created_at, updated_at`
// scanWorker maps one row onto a domain.Worker.
func scanWorker(row interface{ Scan(dest ...any) error }) (*domain.Worker, error) {
var (
w domain.Worker
status string
trust string
caps string
)
var (
ownerID sql.NullString
lastHeartbeat, created, updated sql.NullInt64
)
if err := row.Scan(
&w.ID, &w.Name, &caps, &status, &ownerID, &trust,
&lastHeartbeat, &created, &updated,
); err != nil {
return nil, err
}
w.LastHeartbeatAt = decodeTime(lastHeartbeat.Int64)
w.CreatedAt = decodeTime(created.Int64)
w.UpdatedAt = decodeTime(updated.Int64)
if err := decodeJSON(caps, &w.Capabilities); err != nil {
return nil, err
}
w.Status = domain.WorkerStatus(status)
w.TrustLevel = domain.WorkerTrust(trust)
if ownerID.Valid {
if id, err := uuid.Parse(ownerID.String); err == nil {
w.OwnerID = &id
}
}
return &w, nil
}
func (r *WorkerRepo) Insert(ctx context.Context, w *domain.Worker) error {
_, err := conn(ctx, r.db).ExecContext(ctx, `
INSERT INTO workers (id, name, capabilities, status, owner_id, trust_level,
last_heartbeat_at, created_at, updated_at)
VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?)`,
w.ID.String(), w.Name, encodeJSON(w.Capabilities), string(w.Status),
nullableUUID(w.OwnerID), string(w.TrustLevel),
encodeTime(w.LastHeartbeatAt), encodeTime(w.CreatedAt), encodeTime(w.UpdatedAt))
return err
}
func (r *WorkerRepo) Get(ctx context.Context, id uuid.UUID) (*domain.Worker, error) {
row := conn(ctx, r.db).QueryRowContext(ctx,
"SELECT "+workerColumns+" FROM workers WHERE id = ?", id.String())
worker, err := scanWorker(row)
return worker, mapErrNoRows(err, domain.ErrWorkerNotFound)
}
func (r *WorkerRepo) Touch(ctx context.Context, id uuid.UUID, at time.Time) error {
_, err := conn(ctx, r.db).ExecContext(ctx,
"UPDATE workers SET last_heartbeat_at = ?, status = ?, updated_at = ? WHERE id = ?",
encodeTime(at), string(domain.WorkerOnline), encodeTime(at), id.String())
return err
}
func (r *WorkerRepo) MarkStaleOffline(ctx context.Context, cutoff time.Time) (int64, error) {
res, err := conn(ctx, r.db).ExecContext(ctx,
"UPDATE workers SET status = ?, updated_at = ? WHERE last_heartbeat_at < ? AND status <> ?",
string(domain.WorkerOffline), encodeTime(cutoff), encodeTime(cutoff),
string(domain.WorkerOffline))
if err != nil {
return 0, err
}
return res.RowsAffected()
}
@@ -0,0 +1,72 @@
package auth
import (
"fmt"
"time"
"github.com/golang-jwt/jwt/v5"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
)
// Claims is the payload of a signed token. Subject (from RegisteredClaims) is
// the user id — it becomes the coordinator's jobs.owner_id; Role drives
// authorization; Verified tells the coordinator whether this user's workers are
// trusted (results accepted without quorum). Both services verify this token
// locally with the shared HS256 secret, so no runtime call back to the
// userservice is ever needed.
type Claims struct {
Role domain.Role `json:"role"`
Verified bool `json:"verified"`
jwt.RegisteredClaims
}
// Issuer signs and verifies tokens with a shared HS256 secret.
type Issuer struct {
secret []byte
ttl time.Duration
now func() time.Time
}
// NewIssuer builds an Issuer. now defaults to time.Now when nil; tests inject a
// fixed clock to make expiry deterministic.
func NewIssuer(secret string, ttl time.Duration, now func() time.Time) Issuer {
if now == nil {
now = time.Now
}
return Issuer{secret: []byte(secret), ttl: ttl, now: now}
}
// Issue returns a signed token for the user, valid for the configured TTL. It
// takes the whole user so every trust-bearing field (role, verified) travels in
// the token, keeping the two services from needing a runtime lookup.
func (i Issuer) Issue(u *domain.User) (string, error) {
now := i.now()
claims := Claims{
Role: u.Role,
Verified: u.Verified,
RegisteredClaims: jwt.RegisteredClaims{
Subject: u.ID.String(),
IssuedAt: jwt.NewNumericDate(now),
ExpiresAt: jwt.NewNumericDate(now.Add(i.ttl)),
},
}
return jwt.NewWithClaims(jwt.SigningMethodHS256, claims).SignedString(i.secret)
}
// Verify checks the signature and expiry and returns the claims. It pins the
// algorithm to HMAC, rejecting a token that asks for "none" or an RS256 public
// key — the classic algorithm-substitution attack against naive verifiers.
func (i Issuer) Verify(token string) (*Claims, error) {
var claims Claims
_, err := jwt.ParseWithClaims(token, &claims, func(t *jwt.Token) (any, error) {
if _, ok := t.Method.(*jwt.SigningMethodHMAC); !ok {
return nil, fmt.Errorf("unexpected signing method: %v", t.Header["alg"])
}
return i.secret, nil
})
if err != nil {
return nil, err
}
return &claims, nil
}
@@ -0,0 +1,77 @@
package auth
import (
"testing"
"time"
"github.com/golang-jwt/jwt/v5"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
)
const testSecret = "test-secret-at-least-32-bytes-long!!"
func TestIssueVerifyRoundTrip(t *testing.T) {
iss := NewIssuer(testSecret, time.Hour, nil)
id := uuid.New()
token, err := iss.Issue(&domain.User{ID: id, Role: domain.RoleAdmin, Verified: true})
if err != nil {
t.Fatalf("issue: %v", err)
}
claims, err := iss.Verify(token)
if err != nil {
t.Fatalf("verify: %v", err)
}
if claims.Subject != id.String() {
t.Errorf("sub = %q, want %q", claims.Subject, id.String())
}
if claims.Role != domain.RoleAdmin {
t.Errorf("role = %q, want admin", claims.Role)
}
if !claims.Verified {
t.Error("verified claim not carried in token")
}
}
func TestVerifyRejectsExpired(t *testing.T) {
// Negative TTL: the token is already expired when issued.
iss := NewIssuer(testSecret, -time.Minute, nil)
token, _ := iss.Issue(&domain.User{ID: uuid.New(), Role: domain.RoleUser})
if _, err := iss.Verify(token); err == nil {
t.Error("expired token accepted")
}
}
func TestVerifyRejectsWrongSecret(t *testing.T) {
token, _ := NewIssuer(testSecret, time.Hour, nil).Issue(&domain.User{ID: uuid.New(), Role: domain.RoleUser})
other := NewIssuer("another-secret-also-32-bytes-long!!!", time.Hour, nil)
if _, err := other.Verify(token); err == nil {
t.Error("token verified under the wrong secret")
}
}
func TestVerifyRejectsNoneAlgorithm(t *testing.T) {
// Forge a token signed with "none" — the classic algorithm-substitution
// attack. A verifier that trusts the header's alg would accept it.
tok := jwt.NewWithClaims(jwt.SigningMethodNone, Claims{
Role: domain.RoleAdmin,
RegisteredClaims: jwt.RegisteredClaims{
Subject: uuid.New().String(),
ExpiresAt: jwt.NewNumericDate(time.Now().Add(time.Hour)),
},
})
raw, err := tok.SignedString(jwt.UnsafeAllowNoneSignatureType)
if err != nil {
t.Fatalf("sign none: %v", err)
}
iss := NewIssuer(testSecret, time.Hour, nil)
if _, err := iss.Verify(raw); err == nil {
t.Error("none-signed token accepted")
}
}
@@ -0,0 +1,40 @@
// Package auth holds the cryptographic adapters — password hashing and JWT
// signing/verification. They implement use-case ports and keep bcrypt and the
// JWT library out of the domain and use-case layers.
package auth
import "golang.org/x/crypto/bcrypt"
// Hasher turns plaintext passwords into storable hashes and checks them back.
type Hasher struct {
cost int
}
// NewHasher builds a Hasher. A cost of 0 uses bcrypt's default work factor.
func NewHasher(cost int) Hasher {
if cost == 0 {
cost = bcrypt.DefaultCost
}
return Hasher{cost: cost}
}
// Hash returns the bcrypt hash of password. The salt and the cost are embedded
// in the returned string, so nothing else needs to be stored alongside it.
//
// bcrypt silently ignores input past 72 bytes; the use case rejects longer
// passwords before reaching here so a truncated tail never becomes a security
// surprise.
func (h Hasher) Hash(password string) (string, error) {
b, err := bcrypt.GenerateFromPassword([]byte(password), h.cost)
if err != nil {
return "", err
}
return string(b), nil
}
// Compare reports whether password matches the stored hash. It returns a
// non-nil error (bcrypt.ErrMismatchedHashAndPassword) on any mismatch, which
// the caller collapses into a generic authentication failure.
func (h Hasher) Compare(hash, password string) error {
return bcrypt.CompareHashAndPassword([]byte(hash), []byte(password))
}
@@ -0,0 +1,30 @@
package auth
import "testing"
func TestHashAndCompare(t *testing.T) {
h := NewHasher(0) // default cost
hash, err := h.Hash("correct horse battery staple")
if err != nil {
t.Fatalf("hash: %v", err)
}
if hash == "correct horse battery staple" {
t.Fatal("hash must not equal the plaintext")
}
if err := h.Compare(hash, "correct horse battery staple"); err != nil {
t.Errorf("correct password rejected: %v", err)
}
if err := h.Compare(hash, "wrong password"); err == nil {
t.Error("wrong password accepted")
}
}
func TestHashSaltsEachTime(t *testing.T) {
h := NewHasher(0)
a, _ := h.Hash("same")
b, _ := h.Hash("same")
if a == b {
t.Error("two hashes of the same password must differ (random salt)")
}
}
@@ -0,0 +1,13 @@
package domain
import "errors"
// Domain validation errors. They describe an entity that cannot be constructed,
// independent of storage or transport, and the HTTP layer maps them to 400.
var (
ErrEmptyEmail = errors.New("email is required")
ErrInvalidEmail = errors.New("email is not a valid address")
ErrEmptyPasswordHash = errors.New("password hash is required")
ErrWorkerKeyNameTooLong = errors.New("worker key name is too long")
)
@@ -0,0 +1,84 @@
package domain
import (
"net/mail"
"strings"
"time"
"github.com/google/uuid"
)
type Role string
const (
RoleAdmin Role = "admin"
RoleUser Role = "user"
)
func (r Role) Valid() bool {
switch r {
case RoleAdmin, RoleUser:
return true
default:
return false
}
}
type User struct {
ID uuid.UUID
Email string
PasswordHash string
Role Role
// Verified marks a trusted contributor whose workers' results the
// coordinator accepts without quorum. Distinct from Role; granted by an
// admin, defaults to false.
Verified bool
CreatedAt time.Time
UpdatedAt time.Time
}
// NewUser builds a freshly registered account. It normalises the email and
// enforces every invariant a row must satisfy, so an invalid User cannot be
// constructed. The caller supplies the already-hashed password — hashing is an
// adapter's job, not the domain's.
//
// Registration always produces a plain user; promotion to admin is a manual,
// out-of-band operation, never something a request can trigger.
func NewUser(email, passwordHash string, now time.Time) (*User, error) {
email = NormalizeEmail(email)
if err := validateEmail(email); err != nil {
return nil, err
}
if passwordHash == "" {
return nil, ErrEmptyPasswordHash
}
return &User{
ID: uuid.New(),
Email: email,
PasswordHash: passwordHash,
Role: RoleUser,
CreatedAt: now,
UpdatedAt: now,
}, nil
}
// NormalizeEmail lower-cases and trims an address so that "Bob@X.com " and
// "bob@x.com" resolve to the same account. Every lookup and every insert must
// pass through here, matching the ck_users_email_lower database constraint.
func NormalizeEmail(email string) string {
return strings.ToLower(strings.TrimSpace(email))
}
func validateEmail(email string) error {
if email == "" {
return ErrEmptyEmail
}
// A minimal shape check, not full RFC 5322: real deliverability is proven by
// sending mail, not by a regex. mail.ParseAddress also accepts the
// "Name <addr>" form, so we insist the parsed address equals the input.
addr, err := mail.ParseAddress(email)
if err != nil || addr.Address != email {
return ErrInvalidEmail
}
return nil
}
@@ -0,0 +1,62 @@
package domain
import (
"errors"
"testing"
"time"
"github.com/google/uuid"
)
func TestNewUserNormalisesAndValidates(t *testing.T) {
now := time.Date(2026, 7, 26, 12, 0, 0, 0, time.UTC)
u, err := NewUser(" Bob@Example.COM ", "hashed", now)
if err != nil {
t.Fatalf("unexpected error: %v", err)
}
if u.Email != "bob@example.com" {
t.Errorf("email not normalised: got %q", u.Email)
}
if u.Role != RoleUser {
t.Errorf("new user must default to RoleUser, got %q", u.Role)
}
if u.ID == uuid.Nil {
t.Error("new user must get an id")
}
if !u.CreatedAt.Equal(now) || !u.UpdatedAt.Equal(now) {
t.Error("timestamps not set from clock")
}
}
func TestNewUserRejectsBadInput(t *testing.T) {
now := time.Now()
cases := []struct {
name string
email string
hash string
wantErr error
}{
{"empty email", "", "h", ErrEmptyEmail},
{"no domain", "bob", "h", ErrInvalidEmail},
{"name form", "Bob <bob@x.com>", "h", ErrInvalidEmail},
{"empty hash", "bob@x.com", "", ErrEmptyPasswordHash},
}
for _, tc := range cases {
t.Run(tc.name, func(t *testing.T) {
_, err := NewUser(tc.email, tc.hash, now)
if !errors.Is(err, tc.wantErr) {
t.Errorf("got %v, want %v", err, tc.wantErr)
}
})
}
}
func TestRoleValid(t *testing.T) {
if !RoleUser.Valid() || !RoleAdmin.Valid() {
t.Error("user and admin must be valid")
}
if Role("root").Valid() {
t.Error("unknown role must be invalid")
}
}
@@ -0,0 +1,84 @@
package domain
import (
"crypto/rand"
"crypto/sha256"
"encoding/base64"
"encoding/hex"
"strings"
"time"
"github.com/google/uuid"
)
const (
// workerKeyLabel makes a key self-describing when it turns up in a log or an
// env var, and lets a client sanity-check the shape before exchanging it.
workerKeyLabel = "scimesh_wk_live_"
// workerKeyRandomBytes is the entropy behind the secret. 24 bytes (192 bits)
// is far beyond guessable, which is why the stored hash needs no salt.
workerKeyRandomBytes = 24
// workerKeyPrefixChars is how much of the random tail we keep, alongside the
// label, as the non-secret identifier shown in the UI.
workerKeyPrefixChars = 8
// workerKeyNameMax caps the user-supplied label.
workerKeyNameMax = 100
// workerKeyDefaultName is used when the caller supplies no label.
workerKeyDefaultName = "my machine"
)
// WorkerKey is a long-lived, per-user credential for running a worker. The
// secret itself is never stored — only TokenHash — so the plaintext returned by
// NewWorkerKey is the one and only chance to show it to the user.
type WorkerKey struct {
ID uuid.UUID
UserID uuid.UUID
Name string
TokenHash string
Prefix string
CreatedAt time.Time
LastUsedAt *time.Time
RevokedAt *time.Time
}
// NewWorkerKey mints a key for a user and returns both the entity (carrying only
// the hash) and the one-time plaintext to hand back to the caller. The label is
// trimmed and defaulted; an over-long one is rejected.
func NewWorkerKey(userID uuid.UUID, name string, now time.Time) (*WorkerKey, string, error) {
name = strings.TrimSpace(name)
if name == "" {
name = workerKeyDefaultName
}
if len(name) > workerKeyNameMax {
return nil, "", ErrWorkerKeyNameTooLong
}
b := make([]byte, workerKeyRandomBytes)
if _, err := rand.Read(b); err != nil {
return nil, "", err
}
// URL-safe, unpadded: the key rides in env vars and shell commands, so it
// must contain no '=', '+', or '/' that a shell might mangle.
raw := workerKeyLabel + base64.RawURLEncoding.EncodeToString(b)
key := &WorkerKey{
ID: uuid.New(),
UserID: userID,
Name: name,
TokenHash: HashWorkerKey(raw),
Prefix: raw[:len(workerKeyLabel)+workerKeyPrefixChars],
CreatedAt: now,
}
return key, raw, nil
}
// HashWorkerKey returns the hex SHA-256 of a presented key. Exchange hashes the
// incoming key the same way and looks the row up by it, so the plaintext never
// has to be compared directly.
func HashWorkerKey(raw string) string {
sum := sha256.Sum256([]byte(raw))
return hex.EncodeToString(sum[:])
}
// Revoked reports whether the key has been retired and must no longer exchange.
func (k *WorkerKey) Revoked() bool { return k.RevokedAt != nil }
@@ -0,0 +1,62 @@
package domain_test
import (
"errors"
"strings"
"testing"
"time"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
)
func TestNewWorkerKeyShape(t *testing.T) {
owner := uuid.New()
now := time.Date(2026, 7, 26, 0, 0, 0, 0, time.UTC)
key, raw, err := domain.NewWorkerKey(owner, "home-desktop", now)
if err != nil {
t.Fatalf("NewWorkerKey: %v", err)
}
if !strings.HasPrefix(raw, "scimesh_wk_live_") {
t.Errorf("raw key has no recognisable label: %q", raw)
}
if key.TokenHash != domain.HashWorkerKey(raw) {
t.Error("stored hash does not match the plaintext")
}
if key.TokenHash == raw || strings.Contains(key.TokenHash, raw) {
t.Error("plaintext leaked into the stored hash")
}
if !strings.HasPrefix(raw, key.Prefix) {
t.Errorf("prefix %q is not a leading slice of the key", key.Prefix)
}
if key.UserID != owner || key.CreatedAt != now || key.Revoked() {
t.Errorf("unexpected key metadata: %+v", key)
}
}
func TestNewWorkerKeyDefaultsBlankName(t *testing.T) {
key, _, err := domain.NewWorkerKey(uuid.New(), " ", time.Now())
if err != nil {
t.Fatalf("NewWorkerKey: %v", err)
}
if key.Name == "" {
t.Error("blank name was not defaulted")
}
}
func TestNewWorkerKeyRejectsLongName(t *testing.T) {
_, _, err := domain.NewWorkerKey(uuid.New(), strings.Repeat("x", 101), time.Now())
if !errors.Is(err, domain.ErrWorkerKeyNameTooLong) {
t.Errorf("got %v, want ErrWorkerKeyNameTooLong", err)
}
}
func TestNewWorkerKeyUniquePerCall(t *testing.T) {
a, rawA, _ := domain.NewWorkerKey(uuid.New(), "a", time.Now())
b, rawB, _ := domain.NewWorkerKey(uuid.New(), "b", time.Now())
if rawA == rawB || a.TokenHash == b.TokenHash || a.ID == b.ID {
t.Error("two keys collided; generation is not random")
}
}
@@ -0,0 +1,113 @@
// Package userservice is the SciMesh authentication service, embedded into the
// coordinator binary for single-binary deployments. The packages here are the
// same code the standalone `users/` service runs, with its PostgreSQL storage
// replaced by an embedded SQLite backend. The coordinator's HTTP layer talks
// to it through the usual USERSERVICE_URL proxy, so no proxy code changes.
package userservice
import (
"context"
"fmt"
"log/slog"
"net"
"net/http"
"time"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/auth"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/storage/sqlite"
usershttp "github.com/emil28092005/SciMesh/coordinator/internal/userservice/transport/http"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/usecase"
)
// Config wires the embedded userservice.
type Config struct {
// DBPath is the sqlite database file (for example <data-dir>/users.db).
DBPath string
// JWTSecret must equal the coordinator's JWT_SECRET so tokens verify.
JWTSecret string
// AdminEmail/AdminPassword bootstrap the first admin on first run.
AdminEmail string
AdminPassword string
// Log receives the service's log lines.
Log *slog.Logger
}
// Serve runs the embedded userservice until ctx is cancelled. It listens only
// on the loopback interface; the coordinator proxies to it internally.
func Serve(ctx context.Context, cfg Config) (string, func() error, error) {
db, err := sqlite.Open(cfg.DBPath)
if err != nil {
return "", nil, err
}
if err := sqlite.Migrate(ctx, db, cfg.Log); err != nil {
_ = db.Close()
return "", nil, err
}
clock := NewClock()
users := sqlite.NewUserRepo(db)
workerKeys := sqlite.NewWorkerKeyRepo(db)
hasher := auth.NewHasher(0)
issuer := auth.NewIssuer(cfg.JWTSecret, 24*time.Hour, clock.Now)
uc := usershttp.UseCases{
Register: usecase.NewRegister(users, hasher, clock),
Login: usecase.NewLogin(users, hasher, issuer),
SetVerified: usecase.NewSetVerified(users),
SetRole: usecase.NewSetRole(users),
CreateWorkerKey: usecase.NewCreateWorkerKey(workerKeys, clock),
ListWorkerKeys: usecase.NewListWorkerKeys(workerKeys),
RevokeWorkerKey: usecase.NewRevokeWorkerKey(workerKeys),
ExchangeWorkerKey: usecase.NewExchangeWorkerKey(workerKeys, users, issuer, 24*time.Hour),
Users: users,
}
if cfg.AdminEmail != "" && cfg.AdminPassword != "" {
created, err := usecase.NewBootstrapAdmin(users, hasher, clock).
Execute(ctx, cfg.AdminEmail, cfg.AdminPassword)
if err != nil {
_ = db.Close()
return "", nil, fmt.Errorf("bootstrap admin: %w", err)
}
if created {
cfg.Log.Info("embedded userservice created the admin account", "email", cfg.AdminEmail)
}
}
handler := usershttp.NewServer(cfg.Log, uc, issuer)
handler = http.TimeoutHandler(handler, 15*time.Second, `{"error":"request timeout"}`)
// A fixed loopback port lets the coordinator's proxy reuse its config
// unchanged; collisions are unlikely (no other process binds 18081 on a
// fresh machine) and fail loudly.
listener, err := (&net.ListenConfig{}).Listen(ctx, "tcp", "127.0.0.1:18081")
if err != nil {
_ = db.Close()
return "", nil, fmt.Errorf("listen for embedded userservice: %w", err)
}
server := &http.Server{
Handler: handler,
ReadHeaderTimeout: 10 * time.Second,
}
go func() {
<-ctx.Done()
shutdownCtx, cancel := context.WithTimeout(context.WithoutCancel(ctx), 5*time.Second)
defer cancel()
_ = server.Shutdown(shutdownCtx)
}()
go func() {
if err := server.Serve(listener); err != nil && err != http.ErrServerClosed {
cfg.Log.Error("embedded userservice stopped", "err", err)
}
}()
return listener.Addr().String(), func() error { return db.Close() }, nil
}
// NewClock returns the userservice's wall clock.
func NewClock() *Clock { return &Clock{} }
// Clock implements the userservice usecase clock.
type Clock struct{}
// Now returns the current UTC time.
func (c *Clock) Now() time.Time { return time.Now().UTC() }
@@ -0,0 +1,90 @@
// Package memstore provides in-memory implementations of the usecase ports for
// fast, deterministic tests that need no database.
package memstore
import (
"context"
"sync"
"time"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/usecase"
)
// UserRepo is an in-memory usecase.UserRepository. It stores copies, so callers
// mutating a returned user cannot corrupt the store.
type UserRepo struct {
mu sync.Mutex
byID map[uuid.UUID]domain.User
byEmail map[string]uuid.UUID
}
func NewUserRepo() *UserRepo {
return &UserRepo{
byID: make(map[uuid.UUID]domain.User),
byEmail: make(map[string]uuid.UUID),
}
}
func (r *UserRepo) Insert(_ context.Context, u *domain.User) error {
r.mu.Lock()
defer r.mu.Unlock()
if _, ok := r.byEmail[u.Email]; ok {
return usecase.ErrEmailExists
}
r.byID[u.ID] = *u
r.byEmail[u.Email] = u.ID
return nil
}
func (r *UserRepo) GetByEmail(_ context.Context, email string) (*domain.User, error) {
r.mu.Lock()
defer r.mu.Unlock()
id, ok := r.byEmail[email]
if !ok {
return nil, usecase.ErrUserNotFound
}
u := r.byID[id]
return &u, nil
}
func (r *UserRepo) GetByID(_ context.Context, id uuid.UUID) (*domain.User, error) {
r.mu.Lock()
defer r.mu.Unlock()
u, ok := r.byID[id]
if !ok {
return nil, usecase.ErrUserNotFound
}
return &u, nil
}
func (r *UserRepo) SetVerified(_ context.Context, id uuid.UUID, verified bool) error {
r.mu.Lock()
defer r.mu.Unlock()
u, ok := r.byID[id]
if !ok {
return usecase.ErrUserNotFound
}
u.Verified = verified
r.byID[id] = u
return nil
}
func (r *UserRepo) SetRole(_ context.Context, id uuid.UUID, role domain.Role) error {
r.mu.Lock()
defer r.mu.Unlock()
u, ok := r.byID[id]
if !ok {
return usecase.ErrUserNotFound
}
u.Role = role
r.byID[id] = u
return nil
}
// Clock is a fixed usecase.Clock for deterministic tests.
type Clock struct{ T time.Time }
func (c Clock) Now() time.Time { return c.T }
@@ -0,0 +1,81 @@
package sqlite
import (
"context"
"database/sql"
"embed"
"fmt"
"log/slog"
"regexp"
"sort"
"strconv"
)
//go:embed migrations/*.sql
var migrationFiles embed.FS
var migrationNamePattern = regexp.MustCompile(`^([0-9]+)_[a-z0-9_]+\.sql$`)
// Migrate applies every embedded migration above the PRAGMA user_version
// watermark, each inside its own transaction.
func Migrate(ctx context.Context, db *sql.DB, log *slog.Logger) error {
entries, err := migrationFiles.ReadDir("migrations")
if err != nil {
return fmt.Errorf("read embedded migrations: %w", err)
}
type file struct {
version int
name string
}
var files []file
byVersion := map[int]string{}
for _, entry := range entries {
match := migrationNamePattern.FindStringSubmatch(entry.Name())
if match == nil {
continue
}
version, err := strconv.Atoi(match[1])
if err != nil {
return fmt.Errorf("migration %q has an invalid version: %w", entry.Name(), err)
}
body, err := migrationFiles.ReadFile("migrations/" + entry.Name())
if err != nil {
return fmt.Errorf("read migration %q: %w", entry.Name(), err)
}
byVersion[version] = string(body)
files = append(files, file{version: version, name: entry.Name()})
}
if len(files) == 0 {
return fmt.Errorf("no userservice migrations are embedded")
}
sort.Slice(files, func(i, j int) bool { return files[i].version < files[j].version })
var applied int
if err := db.QueryRowContext(ctx, "PRAGMA user_version").Scan(&applied); err != nil {
return fmt.Errorf("read schema version: %w", err)
}
for _, item := range files {
if item.version <= applied {
continue
}
if log != nil {
log.Info("applying userservice migration", "version", item.version, "file", item.name)
}
tx, err := db.BeginTx(ctx, nil)
if err != nil {
return err
}
if _, err := tx.ExecContext(ctx, byVersion[item.version]); err != nil {
_ = tx.Rollback()
return fmt.Errorf("apply migration %s: %w", item.name, err)
}
if _, err := tx.ExecContext(ctx, fmt.Sprintf("PRAGMA user_version = %d", item.version)); err != nil {
_ = tx.Rollback()
return fmt.Errorf("advance schema version after %s: %w", item.name, err)
}
if err := tx.Commit(); err != nil {
return fmt.Errorf("commit migration %s: %w", item.name, err)
}
}
return nil
}
@@ -0,0 +1,24 @@
-- 0001: userservice schema. Users and long-lived worker keys, in the same
-- style as the coordinator's sqlite schema: TEXT ids, INTEGER timestamps.
CREATE TABLE IF NOT EXISTS users (
id TEXT PRIMARY KEY,
email TEXT NOT NULL UNIQUE,
password_hash TEXT NOT NULL,
role TEXT NOT NULL CHECK (role IN ('admin','user')),
verified INTEGER NOT NULL DEFAULT 0,
created_at INTEGER NOT NULL,
updated_at INTEGER NOT NULL
);
CREATE TABLE IF NOT EXISTS worker_keys (
id TEXT PRIMARY KEY,
user_id TEXT NOT NULL REFERENCES users(id) ON DELETE CASCADE,
name TEXT NOT NULL,
token_hash TEXT NOT NULL UNIQUE,
prefix TEXT NOT NULL,
created_at INTEGER NOT NULL,
last_used_at INTEGER,
revoked_at INTEGER
);
CREATE INDEX IF NOT EXISTS ix_worker_keys_user ON worker_keys (user_id);
@@ -0,0 +1,256 @@
// Package sqlite implements the userservice repository ports on an embedded
// SQLite database, mirroring the coordinator's single-binary storage choice.
package sqlite
import (
"context"
"database/sql"
"errors"
"fmt"
"time"
_ "modernc.org/sqlite"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/usecase"
)
const userColumns = `id, email, password_hash, role, verified, created_at, updated_at`
// scanUser maps one row onto a domain.User.
func scanUser(row interface{ Scan(dest ...any) error }) (*domain.User, error) {
var (
u domain.User
role string
verified int64
)
var created, updated sql.NullInt64
if err := row.Scan(&u.ID, &u.Email, &u.PasswordHash, &role, &verified, &created, &updated); err != nil {
return nil, err
}
u.Role = domain.Role(role)
u.Verified = verified != 0
u.CreatedAt = decodeTime(created.Int64)
u.UpdatedAt = decodeTime(updated.Int64)
return &u, nil
}
// UserRepo implements usecase.UserRepository on SQLite.
type UserRepo struct {
db *sql.DB
}
func NewUserRepo(db *sql.DB) *UserRepo {
return &UserRepo{db: db}
}
func (r *UserRepo) Insert(ctx context.Context, u *domain.User) error {
_, err := r.db.ExecContext(ctx, `
INSERT INTO users (id, email, password_hash, role, verified, created_at, updated_at)
VALUES (?, ?, ?, ?, ?, ?, ?)`,
u.ID.String(), u.Email, u.PasswordHash, string(u.Role), boolInt(u.Verified),
u.CreatedAt.UnixNano(), u.UpdatedAt.UnixNano())
if err != nil && isUnique(err) {
return usecase.ErrEmailExists
}
return err
}
func (r *UserRepo) GetByEmail(ctx context.Context, email string) (*domain.User, error) {
return r.getBy(ctx, "email = ?", email)
}
func (r *UserRepo) GetByID(ctx context.Context, id uuid.UUID) (*domain.User, error) {
return r.getBy(ctx, "id = ?", id.String())
}
func (r *UserRepo) getBy(ctx context.Context, clause string, arg any) (*domain.User, error) {
// #nosec G202 -- clause is an internal constant, never user input.
row := r.db.QueryRowContext(ctx, "SELECT "+userColumns+" FROM users WHERE "+clause, arg)
user, err := scanUser(row)
return user, mapErrNoRows(err, usecase.ErrUserNotFound)
}
func (r *UserRepo) SetVerified(ctx context.Context, id uuid.UUID, verified bool) error {
res, err := r.db.ExecContext(ctx,
"UPDATE users SET verified = ?, updated_at = ? WHERE id = ?",
boolInt(verified), time.Now().UnixNano(), id.String())
if err != nil {
return err
}
return rowsAffectedOrNotFound(res, usecase.ErrUserNotFound)
}
func (r *UserRepo) SetRole(ctx context.Context, id uuid.UUID, role domain.Role) error {
res, err := r.db.ExecContext(ctx,
"UPDATE users SET role = ?, updated_at = ? WHERE id = ?",
string(role), time.Now().UnixNano(), id.String())
if err != nil {
return err
}
return rowsAffectedOrNotFound(res, usecase.ErrUserNotFound)
}
const workerKeyColumns = `id, user_id, name, token_hash, prefix, created_at, last_used_at, revoked_at`
func scanWorkerKey(row interface{ Scan(dest ...any) error }) (*domain.WorkerKey, error) {
var (
k domain.WorkerKey
lastUsed sql.NullInt64
revoked sql.NullInt64
created sql.NullInt64
)
if err := row.Scan(&k.ID, &k.UserID, &k.Name, &k.TokenHash, &k.Prefix, &created, &lastUsed, &revoked); err != nil {
return nil, err
}
k.CreatedAt = decodeTime(created.Int64)
if lastUsed.Valid {
value := decodeTime(lastUsed.Int64)
k.LastUsedAt = &value
}
if revoked.Valid {
value := decodeTime(revoked.Int64)
k.RevokedAt = &value
}
return &k, nil
}
// WorkerKeyRepo implements usecase.WorkerKeyRepository on SQLite.
type WorkerKeyRepo struct {
db *sql.DB
}
func NewWorkerKeyRepo(db *sql.DB) *WorkerKeyRepo {
return &WorkerKeyRepo{db: db}
}
func (r *WorkerKeyRepo) Insert(ctx context.Context, k *domain.WorkerKey) error {
_, err := r.db.ExecContext(ctx, `
INSERT INTO worker_keys (id, user_id, name, token_hash, prefix, created_at, last_used_at, revoked_at)
VALUES (?, ?, ?, ?, ?, ?, ?, ?)`,
k.ID.String(), k.UserID.String(), k.Name, k.TokenHash, k.Prefix,
k.CreatedAt.UnixNano(), nullableTime(k.LastUsedAt), nullableTime(k.RevokedAt))
return err
}
func (r *WorkerKeyRepo) ListByUser(ctx context.Context, userID uuid.UUID) ([]*domain.WorkerKey, error) {
rows, err := r.db.QueryContext(ctx,
"SELECT "+workerKeyColumns+" FROM worker_keys WHERE user_id = ? AND revoked_at IS NULL ORDER BY created_at DESC",
userID.String())
if err != nil {
return nil, err
}
defer func() { _ = rows.Close() }()
var keys []*domain.WorkerKey
for rows.Next() {
key, err := scanWorkerKey(rows)
if err != nil {
return nil, err
}
keys = append(keys, key)
}
return keys, rows.Err()
}
func (r *WorkerKeyRepo) GetActiveByHash(ctx context.Context, tokenHash string) (*domain.WorkerKey, error) {
row := r.db.QueryRowContext(ctx,
"SELECT "+workerKeyColumns+" FROM worker_keys WHERE token_hash = ? AND revoked_at IS NULL",
tokenHash)
key, err := scanWorkerKey(row)
return key, mapErrNoRows(err, usecase.ErrWorkerKeyNotFound)
}
func (r *WorkerKeyRepo) Revoke(ctx context.Context, id, userID uuid.UUID) error {
res, err := r.db.ExecContext(ctx,
"UPDATE worker_keys SET revoked_at = ? WHERE id = ? AND user_id = ? AND revoked_at IS NULL",
time.Now().UnixNano(), id.String(), userID.String())
if err != nil {
return err
}
return rowsAffectedOrNotFound(res, usecase.ErrWorkerKeyNotFound)
}
func (r *WorkerKeyRepo) TouchLastUsed(ctx context.Context, id uuid.UUID) error {
_, err := r.db.ExecContext(ctx,
"UPDATE worker_keys SET last_used_at = ? WHERE id = ?",
time.Now().UnixNano(), id.String())
return err
}
// --- helpers ---------------------------------------------------------------
func boolInt(b bool) int {
if b {
return 1
}
return 0
}
func nullableTime(t *time.Time) any {
if t == nil {
return nil
}
return t.UnixNano()
}
func decodeTime(raw any) time.Time {
switch v := raw.(type) {
case int64:
return time.Unix(0, v).UTC()
}
return time.Time{}
}
func mapErrNoRows(err error, notFound error) error {
if errors.Is(err, sql.ErrNoRows) {
return notFound
}
return err
}
func rowsAffectedOrNotFound(res sql.Result, notFound error) error {
affected, err := res.RowsAffected()
if err != nil {
return err
}
if affected == 0 {
return notFound
}
return nil
}
// isUnique reports whether the error is a SQLite unique-constraint violation.
func isUnique(err error) bool {
return err != nil && (contains(err.Error(), "UNIQUE constraint failed") ||
contains(err.Error(), "constraint failed"))
}
func contains(haystack, needle string) bool {
return len(haystack) >= len(needle) && (haystack == needle || len(haystack) > len(needle) &&
(indexOf(haystack, needle) >= 0))
}
func indexOf(haystack, needle string) int {
for i := 0; i+len(needle) <= len(haystack); i++ {
if haystack[i:i+len(needle)] == needle {
return i
}
}
return -1
}
// Open opens (and creates when missing) the userservice database file.
func Open(path string) (*sql.DB, error) {
dsn := fmt.Sprintf("file:%s?_pragma=busy_timeout(10000)&_pragma=journal_mode(WAL)&_pragma=foreign_keys(1)&_pragma=synchronous(NORMAL)", path)
db, err := sql.Open("sqlite", dsn)
if err != nil {
return nil, fmt.Errorf("open userservice database: %w", err)
}
if err := db.PingContext(context.Background()); err != nil {
_ = db.Close()
return nil, fmt.Errorf("ping userservice database: %w", err)
}
return db, nil
}
@@ -0,0 +1,137 @@
package sqlite
import (
"context"
"database/sql"
"errors"
"path/filepath"
"testing"
"time"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/usecase"
)
func newTestDB(t *testing.T) *sql.DB {
t.Helper()
db, err := Open(filepath.Join(t.TempDir(), "users.db"))
if err != nil {
t.Fatalf("open: %v", err)
}
t.Cleanup(func() { _ = db.Close() })
if err := Migrate(context.Background(), db, nil); err != nil {
t.Fatalf("migrate: %v", err)
}
return db
}
func TestMigrateIsIdempotent(t *testing.T) {
db := newTestDB(t)
if err := Migrate(context.Background(), db, nil); err != nil {
t.Fatalf("second migrate: %v", err)
}
}
func TestUserRepoRoundTripAndSentinels(t *testing.T) {
db := newTestDB(t)
ctx := context.Background()
repo := NewUserRepo(db)
user, err := domain.NewUser("root@scimesh.local", "hash", time.Now().UTC())
if err != nil {
t.Fatal(err)
}
if err := repo.Insert(ctx, user); err != nil {
t.Fatal(err)
}
got, err := repo.GetByEmail(ctx, "root@scimesh.local")
if err != nil {
t.Fatal(err)
}
if got.ID != user.ID || got.Role != domain.RoleUser || got.Verified {
t.Errorf("user = %+v", got)
}
duplicate, err := domain.NewUser("ROOT@scimesh.local", "hash2", time.Now().UTC())
if err != nil {
t.Fatal(err)
}
if err := repo.Insert(ctx, duplicate); !errors.Is(err, usecase.ErrEmailExists) {
t.Errorf("duplicate email err = %v, want ErrEmailExists", err)
}
if _, err := repo.GetByID(ctx, uuid.New()); !errors.Is(err, usecase.ErrUserNotFound) {
t.Errorf("missing user err = %v, want ErrUserNotFound", err)
}
if err := repo.SetVerified(ctx, user.ID, true); err != nil {
t.Fatal(err)
}
got, err = repo.GetByID(ctx, user.ID)
if err != nil {
t.Fatal(err)
}
if !got.Verified {
t.Error("verified flag did not persist")
}
if err := repo.SetRole(ctx, user.ID, domain.RoleAdmin); err != nil {
t.Fatal(err)
}
got, err = repo.GetByID(ctx, user.ID)
if err != nil {
t.Fatal(err)
}
if got.Role != domain.RoleAdmin {
t.Errorf("role = %q, want admin", got.Role)
}
}
func TestWorkerKeyRepoLifecycle(t *testing.T) {
db := newTestDB(t)
ctx := context.Background()
repo := NewWorkerKeyRepo(db)
user, err := domain.NewUser("worker@scimesh.local", "hash", time.Now().UTC())
if err != nil {
t.Fatal(err)
}
if err := NewUserRepo(db).Insert(ctx, user); err != nil {
t.Fatal(err)
}
key, plaintext, err := domain.NewWorkerKey(user.ID, "my machine", time.Now().UTC())
if err != nil {
t.Fatal(err)
}
if plaintext == "" || key.TokenHash == "" {
t.Fatal("key must carry a hash and return a plaintext")
}
if err := repo.Insert(ctx, key); err != nil {
t.Fatal(err)
}
found, err := repo.GetActiveByHash(ctx, key.TokenHash)
if err != nil {
t.Fatal(err)
}
if found.ID != key.ID {
t.Errorf("key = %+v", found)
}
keys, err := repo.ListByUser(ctx, user.ID)
if err != nil {
t.Fatal(err)
}
if len(keys) != 1 {
t.Errorf("keys = %d, want 1", len(keys))
}
if err := repo.TouchLastUsed(ctx, key.ID); err != nil {
t.Fatal(err)
}
if err := repo.Revoke(ctx, key.ID, user.ID); err != nil {
t.Fatal(err)
}
if _, err := repo.GetActiveByHash(ctx, key.TokenHash); !errors.Is(err, usecase.ErrWorkerKeyNotFound) {
t.Errorf("revoked key err = %v, want ErrWorkerKeyNotFound", err)
}
if err := repo.Revoke(ctx, key.ID, user.ID); !errors.Is(err, usecase.ErrWorkerKeyNotFound) {
t.Errorf("double revoke err = %v, want ErrWorkerKeyNotFound", err)
}
}
@@ -0,0 +1,93 @@
package http
import (
"time"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
)
// registerRequest / loginRequest are the JSON bodies clients POST. Kept separate
// from the domain so the wire format can evolve without touching the entity.
type registerRequest struct {
Email string `json:"email"`
Password string `json:"password"`
}
type loginRequest struct {
Email string `json:"email"`
Password string `json:"password"`
}
// userResponse is the public view of a user. It never carries the password hash.
type userResponse struct {
ID string `json:"id"`
Email string `json:"email"`
Role string `json:"role"`
Verified bool `json:"verified"`
CreatedAt string `json:"created_at"`
}
type loginResponse struct {
Token string `json:"token"`
User userResponse `json:"user"`
}
func toUserResponse(u *domain.User) userResponse {
return userResponse{
ID: u.ID.String(),
Email: u.Email,
Role: string(u.Role),
Verified: u.Verified,
CreatedAt: u.CreatedAt.UTC().Format(time.RFC3339),
}
}
// createWorkerKeyRequest is the body for minting a worker key. Name is an
// optional human label; the domain defaults it when blank.
type createWorkerKeyRequest struct {
Name string `json:"name"`
}
// exchangeWorkerKeyRequest trades a worker key for a short-lived JWT.
type exchangeWorkerKeyRequest struct {
Key string `json:"key"`
}
type exchangeWorkerKeyResponse struct {
Token string `json:"token"`
ExpiresIn int `json:"expires_in"`
}
// workerKeyResponse is the public view of a key. It never carries the secret —
// only the non-secret prefix used to identify a row.
type workerKeyResponse struct {
ID string `json:"id"`
Name string `json:"name"`
Prefix string `json:"prefix"`
CreatedAt string `json:"created_at"`
LastUsedAt string `json:"last_used_at,omitempty"`
}
// createdWorkerKeyResponse extends the public view with the one-time plaintext,
// returned only from the create call and never again.
type createdWorkerKeyResponse struct {
workerKeyResponse
Key string `json:"key"`
}
type workerKeysResponse struct {
WorkerKeys []workerKeyResponse `json:"worker_keys"`
}
func toWorkerKeyResponse(k *domain.WorkerKey) workerKeyResponse {
resp := workerKeyResponse{
ID: k.ID.String(),
Name: k.Name,
Prefix: k.Prefix,
CreatedAt: k.CreatedAt.UTC().Format(time.RFC3339),
}
if k.LastUsedAt != nil {
resp.LastUsedAt = k.LastUsedAt.UTC().Format(time.RFC3339)
}
return resp
}
@@ -0,0 +1,69 @@
package http
import (
"encoding/json"
"errors"
"log/slog"
"net/http"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/usecase"
)
// maxJSONBody caps a request body. Credentials are tiny; anything larger is a
// mistake or an attack, so reject it before allocating.
const maxJSONBody = 1 << 20 // 1 MiB
type errorResponse struct {
Error string `json:"error"`
RequestID string `json:"request_id,omitempty"`
}
func writeJSON(w http.ResponseWriter, status int, v any) {
w.Header().Set("Content-Type", "application/json")
w.WriteHeader(status)
_ = json.NewEncoder(w).Encode(v)
}
// writeError maps a domain or use-case error to an HTTP status and a safe
// message, logging only genuine server faults (5xx). Client errors (4xx) are
// expected and stay out of the error log.
func writeError(w http.ResponseWriter, r *http.Request, log *slog.Logger, err error) {
status, msg := statusForError(err)
if status >= http.StatusInternalServerError {
log.Error("request failed",
"err", err,
"request_id", requestIDFrom(r.Context()),
"path", r.URL.Path,
)
}
writeJSON(w, status, errorResponse{Error: msg, RequestID: requestIDFrom(r.Context())})
}
func statusForError(err error) (int, string) {
switch {
case errors.Is(err, usecase.ErrEmailExists):
return http.StatusConflict, "email already registered"
case errors.Is(err, usecase.ErrInvalidCredentials):
return http.StatusUnauthorized, "invalid email or password"
case errors.Is(err, usecase.ErrUserNotFound):
return http.StatusNotFound, "user not found"
case errors.Is(err, usecase.ErrWorkerKeyNotFound):
return http.StatusNotFound, "worker key not found"
case errors.Is(err, usecase.ErrInvalidWorkerKey):
return http.StatusUnauthorized, "invalid worker key"
case errors.Is(err, domain.ErrWorkerKeyNameTooLong):
return http.StatusBadRequest, "worker key name is too long"
case errors.Is(err, usecase.ErrPasswordTooShort):
return http.StatusBadRequest, "password must be at least 8 characters"
case errors.Is(err, usecase.ErrPasswordTooLong):
return http.StatusBadRequest, "password must be at most 72 bytes"
case errors.Is(err, usecase.ErrInvalidRole):
return http.StatusBadRequest, "invalid role"
case errors.Is(err, domain.ErrEmptyEmail), errors.Is(err, domain.ErrInvalidEmail):
return http.StatusBadRequest, "email is not a valid address"
default:
// Don't leak internals; the real error is in the log under request_id.
return http.StatusInternalServerError, "internal error"
}
}
@@ -0,0 +1,231 @@
package http
import (
"encoding/json"
"errors"
"log/slog"
"net/http"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/usecase"
)
// Handlers holds the use cases each endpoint drives.
type Handlers struct {
register *usecase.Register
login *usecase.Login
setVerified *usecase.SetVerified
setRole *usecase.SetRole
createWorkerKey *usecase.CreateWorkerKey
listWorkerKeys *usecase.ListWorkerKeys
revokeWorkerKey *usecase.RevokeWorkerKey
exchangeWorkerKey *usecase.ExchangeWorkerKey
users usecase.UserRepository
log *slog.Logger
}
// handleHealth is an unauthenticated liveness probe for the container and load
// balancer.
func (h *Handlers) handleHealth(w http.ResponseWriter, _ *http.Request) {
writeJSON(w, http.StatusOK, map[string]string{"status": "ok"})
}
// handleRegister creates an account. It returns 201 with the public user view,
// 409 if the email is taken, or 400 on a malformed body / weak password.
func (h *Handlers) handleRegister(w http.ResponseWriter, r *http.Request) {
var req registerRequest
if !decodeJSON(w, r, &req) {
return
}
u, err := h.register.Execute(r.Context(), req.Email, req.Password)
if err != nil {
writeError(w, r, h.log, err)
return
}
writeJSON(w, http.StatusCreated, toUserResponse(u))
}
// handleLogin verifies credentials and returns a signed token plus the user.
func (h *Handlers) handleLogin(w http.ResponseWriter, r *http.Request) {
var req loginRequest
if !decodeJSON(w, r, &req) {
return
}
token, u, err := h.login.Execute(r.Context(), req.Email, req.Password)
if err != nil {
writeError(w, r, h.log, err)
return
}
writeJSON(w, http.StatusOK, loginResponse{Token: token, User: toUserResponse(u)})
}
// handleMe returns the caller's own account, proving the token works end to end.
// It reads the user id the JWT middleware stashed in the context.
func (h *Handlers) handleMe(w http.ResponseWriter, r *http.Request) {
id, ok := userIDFrom(r.Context())
if !ok {
unauthorized(w, r)
return
}
u, err := h.users.GetByID(r.Context(), id)
if err != nil {
writeError(w, r, h.log, err)
return
}
writeJSON(w, http.StatusOK, toUserResponse(u))
}
// handleSetVerified grants (verified=true) or revokes (false) the trusted-
// contributor badge for the user in the path. Admin-only; the withAdmin
// middleware has already enforced the role by the time this runs.
func (h *Handlers) handleSetVerified(verified bool) http.HandlerFunc {
return func(w http.ResponseWriter, r *http.Request) {
id, err := uuid.Parse(r.PathValue("id"))
if err != nil {
writeJSON(w, http.StatusBadRequest, errorResponse{
Error: "invalid user id",
RequestID: requestIDFrom(r.Context()),
})
return
}
if err := h.setVerified.Execute(r.Context(), id, verified); err != nil {
writeError(w, r, h.log, err)
return
}
w.WriteHeader(http.StatusNoContent)
}
}
// handleSetRole promotes (admin) or demotes (user) the user in the path. Admin-
// only; the withAdmin middleware has already enforced the caller's role.
func (h *Handlers) handleSetRole(role domain.Role) http.HandlerFunc {
return func(w http.ResponseWriter, r *http.Request) {
id, err := uuid.Parse(r.PathValue("id"))
if err != nil {
writeJSON(w, http.StatusBadRequest, errorResponse{
Error: "invalid user id",
RequestID: requestIDFrom(r.Context()),
})
return
}
if err := h.setRole.Execute(r.Context(), id, role); err != nil {
writeError(w, r, h.log, err)
return
}
w.WriteHeader(http.StatusNoContent)
}
}
// handleCreateWorkerKey mints a long-lived worker key for the authenticated
// caller and returns it once, plaintext included. The user copies it into their
// worker's SCIMESH_WORKER_KEY; it is never retrievable again.
func (h *Handlers) handleCreateWorkerKey(w http.ResponseWriter, r *http.Request) {
id, ok := userIDFrom(r.Context())
if !ok {
unauthorized(w, r)
return
}
// A signed JWT can outlive a demo reset or an account deletion. Check that
// its subject still exists before attempting the insert, otherwise the
// worker_keys foreign key would turn a stale session into an internal error.
if _, err := h.users.GetByID(r.Context(), id); err != nil {
if errors.Is(err, usecase.ErrUserNotFound) {
unauthorized(w, r)
return
}
writeError(w, r, h.log, err)
return
}
var req createWorkerKeyRequest
if !decodeJSON(w, r, &req) {
return
}
key, raw, err := h.createWorkerKey.Execute(r.Context(), id, req.Name)
if err != nil {
writeError(w, r, h.log, err)
return
}
writeJSON(w, http.StatusCreated, createdWorkerKeyResponse{
workerKeyResponse: toWorkerKeyResponse(key),
Key: raw,
})
}
// handleListWorkerKeys returns the caller's live keys (no secrets) for display
// and revocation.
func (h *Handlers) handleListWorkerKeys(w http.ResponseWriter, r *http.Request) {
id, ok := userIDFrom(r.Context())
if !ok {
unauthorized(w, r)
return
}
keys, err := h.listWorkerKeys.Execute(r.Context(), id)
if err != nil {
writeError(w, r, h.log, err)
return
}
out := make([]workerKeyResponse, 0, len(keys))
for _, k := range keys {
out = append(out, toWorkerKeyResponse(k))
}
writeJSON(w, http.StatusOK, workerKeysResponse{WorkerKeys: out})
}
// handleRevokeWorkerKey retires one of the caller's keys. The repository scopes
// the delete to the owner, so a mismatched id is a clean 404, not another user's
// key.
func (h *Handlers) handleRevokeWorkerKey(w http.ResponseWriter, r *http.Request) {
userID, ok := userIDFrom(r.Context())
if !ok {
unauthorized(w, r)
return
}
keyID, err := uuid.Parse(r.PathValue("id"))
if err != nil {
writeJSON(w, http.StatusBadRequest, errorResponse{
Error: "invalid worker key id",
RequestID: requestIDFrom(r.Context()),
})
return
}
if err := h.revokeWorkerKey.Execute(r.Context(), userID, keyID); err != nil {
writeError(w, r, h.log, err)
return
}
w.WriteHeader(http.StatusNoContent)
}
// handleExchangeWorkerKey trades a worker key for a short-lived JWT. It is
// unauthenticated: the key itself is the credential. A worker calls this on
// startup and again to refresh before the JWT expires.
func (h *Handlers) handleExchangeWorkerKey(w http.ResponseWriter, r *http.Request) {
var req exchangeWorkerKeyRequest
if !decodeJSON(w, r, &req) {
return
}
token, expiresIn, err := h.exchangeWorkerKey.Execute(r.Context(), req.Key)
if err != nil {
writeError(w, r, h.log, err)
return
}
writeJSON(w, http.StatusOK, exchangeWorkerKeyResponse{Token: token, ExpiresIn: expiresIn})
}
// decodeJSON reads a size-capped JSON body into dst, rejecting unknown fields.
// It writes a 400 and returns false on any problem, so callers can `if
// !decodeJSON(...) { return }`.
func decodeJSON(w http.ResponseWriter, r *http.Request, dst any) bool {
r.Body = http.MaxBytesReader(w, r.Body, maxJSONBody)
dec := json.NewDecoder(r.Body)
dec.DisallowUnknownFields()
if err := dec.Decode(dst); err != nil {
writeJSON(w, http.StatusBadRequest, errorResponse{
Error: "invalid JSON body",
RequestID: requestIDFrom(r.Context()),
})
return false
}
return true
}
@@ -0,0 +1,149 @@
package http
import (
"context"
"crypto/rand"
"encoding/hex"
"log/slog"
"net/http"
"strings"
"time"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/auth"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
)
type ctxKey string
const (
requestIDKey ctxKey = "request_id"
userIDKey ctxKey = "user_id"
roleKey ctxKey = "role"
)
// withRequestID stamps every request with an ID for correlated logs and error
// bodies. It wraps the auth middleware rather than the other way round, so even
// a rejected request carries an ID the caller can quote in a bug report.
func withRequestID(next http.Handler) http.Handler {
return http.HandlerFunc(func(w http.ResponseWriter, r *http.Request) {
id := newRequestID()
w.Header().Set("X-Request-ID", id)
next.ServeHTTP(w, r.WithContext(context.WithValue(r.Context(), requestIDKey, id)))
})
}
func requestIDFrom(ctx context.Context) string {
if v, ok := ctx.Value(requestIDKey).(string); ok {
return v
}
return ""
}
func newRequestID() string {
var b [8]byte
_, _ = rand.Read(b[:])
return hex.EncodeToString(b[:])
}
// tokenVerifier is the slice of auth.Issuer the JWT middleware needs. Taking an
// interface keeps the middleware testable with a stub verifier.
type tokenVerifier interface {
Verify(token string) (*auth.Claims, error)
}
// withJWT verifies the Bearer token and stashes the caller's id and role in the
// request context. It rejects any request without a valid, unexpired HS256
// token — this is what protects endpoints that act on a specific user.
func withJWT(v tokenVerifier) func(http.Handler) http.Handler {
return func(next http.Handler) http.Handler {
return http.HandlerFunc(func(w http.ResponseWriter, r *http.Request) {
raw := strings.TrimPrefix(r.Header.Get("Authorization"), "Bearer ")
if raw == "" {
unauthorized(w, r)
return
}
claims, err := v.Verify(raw)
if err != nil {
unauthorized(w, r)
return
}
id, err := uuid.Parse(claims.Subject)
if err != nil {
unauthorized(w, r)
return
}
ctx := context.WithValue(r.Context(), userIDKey, id)
ctx = context.WithValue(ctx, roleKey, claims.Role)
next.ServeHTTP(w, r.WithContext(ctx))
})
}
}
func unauthorized(w http.ResponseWriter, r *http.Request) {
w.Header().Set("WWW-Authenticate", "Bearer")
writeJSON(w, http.StatusUnauthorized, errorResponse{
Error: "unauthorized",
RequestID: requestIDFrom(r.Context()),
})
}
// userIDFrom returns the authenticated caller's id, set by withJWT.
func userIDFrom(ctx context.Context) (uuid.UUID, bool) {
id, ok := ctx.Value(userIDKey).(uuid.UUID)
return id, ok
}
// withAdmin rejects any caller whose token role is not admin. It must sit inside
// withJWT, which stamps the role after verifying the token.
func withAdmin(next http.Handler) http.Handler {
return http.HandlerFunc(func(w http.ResponseWriter, r *http.Request) {
if role, ok := r.Context().Value(roleKey).(domain.Role); !ok || role != domain.RoleAdmin {
writeJSON(w, http.StatusForbidden, errorResponse{
Error: "admin role required",
RequestID: requestIDFrom(r.Context()),
})
return
}
next.ServeHTTP(w, r)
})
}
// statusRecorder captures the status code for the access log.
type statusRecorder struct {
http.ResponseWriter
status int
}
func (s *statusRecorder) WriteHeader(code int) {
s.status = code
s.ResponseWriter.WriteHeader(code)
}
// withAccessLog records one structured line per request — the minimum needed to
// debug a distributed system after the fact.
func withAccessLog(log *slog.Logger) func(http.Handler) http.Handler {
return func(next http.Handler) http.Handler {
return http.HandlerFunc(func(w http.ResponseWriter, r *http.Request) {
start := time.Now()
rec := &statusRecorder{ResponseWriter: w, status: http.StatusOK}
next.ServeHTTP(rec, r)
log.Info("request",
"request_id", requestIDFrom(r.Context()),
"method", r.Method,
"path", r.URL.Path,
"status", rec.status,
"duration_ms", time.Since(start).Milliseconds(),
)
})
}
}
// chain applies middleware so that the first argument is the outermost layer.
func chain(h http.Handler, mw ...func(http.Handler) http.Handler) http.Handler {
for i := len(mw) - 1; i >= 0; i-- {
h = mw[i](h)
}
return h
}
@@ -0,0 +1,73 @@
// Package http exposes the userservice over HTTP: registration, login, and a
// token-protected /me. It owns routing, request decoding, and error mapping;
// business rules live in the usecase layer.
package http
import (
"log/slog"
"net/http"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/auth"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/usecase"
)
// UseCases bundles the application services the handlers drive.
type UseCases struct {
Register *usecase.Register
Login *usecase.Login
SetVerified *usecase.SetVerified
SetRole *usecase.SetRole
CreateWorkerKey *usecase.CreateWorkerKey
ListWorkerKeys *usecase.ListWorkerKeys
RevokeWorkerKey *usecase.RevokeWorkerKey
ExchangeWorkerKey *usecase.ExchangeWorkerKey
Users usecase.UserRepository
}
// NewServer wires the routes and the middleware stack and returns the handler.
// The issuer verifies tokens for the JWT-protected routes.
func NewServer(log *slog.Logger, uc UseCases, issuer auth.Issuer) http.Handler {
h := &Handlers{
register: uc.Register,
login: uc.Login,
setVerified: uc.SetVerified,
setRole: uc.SetRole,
createWorkerKey: uc.CreateWorkerKey,
listWorkerKeys: uc.ListWorkerKeys,
revokeWorkerKey: uc.RevokeWorkerKey,
exchangeWorkerKey: uc.ExchangeWorkerKey,
users: uc.Users,
log: log,
}
mux := http.NewServeMux()
// Method-aware patterns (Go 1.22+): a GET to /register is a 405, not a match.
mux.HandleFunc("GET /health", h.handleHealth)
mux.HandleFunc("POST /register", h.handleRegister)
mux.HandleFunc("POST /login", h.handleLogin)
// /me proves a token round-trips; it sits behind JWT auth.
mux.Handle("GET /me", chain(http.HandlerFunc(h.handleMe), withJWT(issuer)))
// Worker keys: a user mints a long-lived key (JWT-protected), and a worker
// trades it for a short-lived JWT on the public exchange endpoint — the key
// itself is the credential there, so no prior token is required.
mux.HandleFunc("POST /worker-tokens/exchange", h.handleExchangeWorkerKey)
mux.Handle("POST /worker-keys", chain(http.HandlerFunc(h.handleCreateWorkerKey), withJWT(issuer)))
mux.Handle("GET /worker-keys", chain(http.HandlerFunc(h.handleListWorkerKeys), withJWT(issuer)))
mux.Handle("DELETE /worker-keys/{id}", chain(http.HandlerFunc(h.handleRevokeWorkerKey), withJWT(issuer)))
// Admin-only: grant or revoke the trusted-contributor badge. withAdmin sits
// inside withJWT so the role is available from the verified token.
mux.Handle("POST /users/{id}/verify",
chain(h.handleSetVerified(true), withJWT(issuer), withAdmin))
mux.Handle("POST /users/{id}/unverify",
chain(h.handleSetVerified(false), withJWT(issuer), withAdmin))
mux.Handle("POST /users/{id}/promote",
chain(h.handleSetRole(domain.RoleAdmin), withJWT(issuer), withAdmin))
mux.Handle("POST /users/{id}/demote",
chain(h.handleSetRole(domain.RoleUser), withJWT(issuer), withAdmin))
// Outermost first: every request gets an ID and an access-log line.
return chain(mux, withRequestID, withAccessLog(log))
}
@@ -0,0 +1,372 @@
package http_test
import (
"bytes"
"context"
"encoding/json"
"errors"
"io"
"log/slog"
"net/http"
"net/http/httptest"
"testing"
"time"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/auth"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/memstore"
apihttp "github.com/emil28092005/SciMesh/coordinator/internal/userservice/transport/http"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/usecase"
)
const secret = "server-test-secret-32-bytes-long!!!!"
func newTestServer() http.Handler {
users := memstore.NewUserRepo()
hasher := auth.NewHasher(4)
clk := memstore.Clock{T: time.Date(2026, 7, 26, 0, 0, 0, 0, time.UTC)}
// Real clock for the issuer so tokens are valid at verification time.
issuer := auth.NewIssuer(secret, time.Hour, nil)
uc := apihttp.UseCases{
Register: usecase.NewRegister(users, hasher, clk),
Login: usecase.NewLogin(users, hasher, issuer),
SetVerified: usecase.NewSetVerified(users),
SetRole: usecase.NewSetRole(users),
Users: users,
}
log := slog.New(slog.NewTextHandler(io.Discard, nil))
return apihttp.NewServer(log, uc, issuer)
}
func do(t *testing.T, h http.Handler, method, path, token string, body any) *httptest.ResponseRecorder {
t.Helper()
var buf bytes.Buffer
if body != nil {
if err := json.NewEncoder(&buf).Encode(body); err != nil {
t.Fatal(err)
}
}
req, err := http.NewRequestWithContext(context.Background(), method, path, &buf)
if err != nil {
t.Fatal(err)
}
if token != "" {
req.Header.Set("Authorization", "Bearer "+token)
}
rec := httptest.NewRecorder()
h.ServeHTTP(rec, req)
return rec
}
func TestRegisterThenLoginThenMe(t *testing.T) {
h := newTestServer()
creds := map[string]string{"email": "flow@example.com", "password": "password123"}
// Register -> 201
rec := do(t, h, http.MethodPost, "/register", "", creds)
if rec.Code != http.StatusCreated {
t.Fatalf("register: got %d, body %s", rec.Code, rec.Body)
}
// Login -> 200 with a token
rec = do(t, h, http.MethodPost, "/login", "", creds)
if rec.Code != http.StatusOK {
t.Fatalf("login: got %d, body %s", rec.Code, rec.Body)
}
var lr struct {
Token string `json:"token"`
User struct {
Email string `json:"email"`
Role string `json:"role"`
} `json:"user"`
}
if err := json.Unmarshal(rec.Body.Bytes(), &lr); err != nil {
t.Fatal(err)
}
if lr.Token == "" || lr.User.Email != "flow@example.com" || lr.User.Role != "user" {
t.Fatalf("unexpected login body: %+v", lr)
}
// /me with the token -> 200, same user
rec = do(t, h, http.MethodGet, "/me", lr.Token, nil)
if rec.Code != http.StatusOK {
t.Fatalf("me: got %d, body %s", rec.Code, rec.Body)
}
var me struct {
Email string `json:"email"`
}
if err := json.Unmarshal(rec.Body.Bytes(), &me); err != nil {
t.Fatal(err)
}
if me.Email != "flow@example.com" {
t.Errorf("me email = %q", me.Email)
}
}
func TestRegisterDuplicate(t *testing.T) {
h := newTestServer()
creds := map[string]string{"email": "dup@example.com", "password": "password123"}
_ = do(t, h, http.MethodPost, "/register", "", creds)
rec := do(t, h, http.MethodPost, "/register", "", creds)
if rec.Code != http.StatusConflict {
t.Errorf("duplicate register: got %d, want 409", rec.Code)
}
}
func TestRegisterValidation(t *testing.T) {
h := newTestServer()
cases := []struct {
name string
body map[string]string
}{
{"weak password", map[string]string{"email": "a@b.com", "password": "short"}},
{"bad email", map[string]string{"email": "nope", "password": "password123"}},
}
for _, tc := range cases {
t.Run(tc.name, func(t *testing.T) {
rec := do(t, h, http.MethodPost, "/register", "", tc.body)
if rec.Code != http.StatusBadRequest {
t.Errorf("got %d, want 400", rec.Code)
}
})
}
}
func TestRegisterRejectsUnknownFields(t *testing.T) {
h := newTestServer()
rec := do(t, h, http.MethodPost, "/register", "", map[string]string{
"email": "a@b.com", "password": "password123", "role": "admin",
})
if rec.Code != http.StatusBadRequest {
t.Errorf("unknown field must be rejected: got %d", rec.Code)
}
}
func TestLoginWrongPassword(t *testing.T) {
h := newTestServer()
_ = do(t, h, http.MethodPost, "/register", "", map[string]string{
"email": "x@example.com", "password": "password123",
})
rec := do(t, h, http.MethodPost, "/login", "", map[string]string{
"email": "x@example.com", "password": "wrongpass1",
})
if rec.Code != http.StatusUnauthorized {
t.Errorf("got %d, want 401", rec.Code)
}
}
func TestMeRequiresToken(t *testing.T) {
h := newTestServer()
if rec := do(t, h, http.MethodGet, "/me", "", nil); rec.Code != http.StatusUnauthorized {
t.Errorf("no token: got %d, want 401", rec.Code)
}
if rec := do(t, h, http.MethodGet, "/me", "garbage.token.here", nil); rec.Code != http.StatusUnauthorized {
t.Errorf("bad token: got %d, want 401", rec.Code)
}
}
func TestHealth(t *testing.T) {
h := newTestServer()
if rec := do(t, h, http.MethodGet, "/health", "", nil); rec.Code != http.StatusOK {
t.Errorf("health: got %d", rec.Code)
}
}
// failingUsers is a UserRepository whose reads fail with an unexpected (non-
// sentinel) error, so the handler must map it to 500 and not leak internals.
type failingUsers struct{ usecase.UserRepository }
func (failingUsers) GetByID(context.Context, uuid.UUID) (*domain.User, error) {
return nil, errors.New("db exploded")
}
func TestMeInternalError(t *testing.T) {
hasher := auth.NewHasher(4)
clk := memstore.Clock{T: time.Date(2026, 7, 26, 0, 0, 0, 0, time.UTC)}
issuer := auth.NewIssuer(secret, time.Hour, nil)
users := failingUsers{UserRepository: memstore.NewUserRepo()}
uc := apihttp.UseCases{
Register: usecase.NewRegister(users, hasher, clk),
Login: usecase.NewLogin(users, hasher, issuer),
SetVerified: usecase.NewSetVerified(users),
SetRole: usecase.NewSetRole(users),
Users: users,
}
h := apihttp.NewServer(slog.New(slog.NewTextHandler(io.Discard, nil)), uc, issuer)
// A structurally valid token for a caller the failing repo can't load.
token, err := issuer.Issue(&domain.User{ID: uuid.New(), Role: domain.RoleUser})
if err != nil {
t.Fatal(err)
}
rec := do(t, h, http.MethodGet, "/me", token, nil)
if rec.Code != http.StatusInternalServerError {
t.Errorf("got %d, want 500", rec.Code)
}
// The body must not disclose the underlying error.
if bytes.Contains(rec.Body.Bytes(), []byte("db exploded")) {
t.Error("internal error leaked to the client")
}
}
// mintToken issues a token with the package secret for a synthetic caller of the
// given role — enough to drive the admin-gated endpoints.
func mintToken(t *testing.T, role domain.Role) string {
t.Helper()
token, err := auth.NewIssuer(secret, time.Hour, nil).Issue(&domain.User{ID: uuid.New(), Role: role})
if err != nil {
t.Fatal(err)
}
return token
}
// registerUser creates an account and returns its id.
func registerUser(t *testing.T, h http.Handler, email string) string {
t.Helper()
rec := do(t, h, http.MethodPost, "/register", "", map[string]string{"email": email, "password": "password123"})
if rec.Code != http.StatusCreated {
t.Fatalf("register: %d", rec.Code)
}
var reg struct {
ID string `json:"id"`
}
if err := json.Unmarshal(rec.Body.Bytes(), &reg); err != nil {
t.Fatal(err)
}
return reg.ID
}
func TestAdminVerifiesUserEndToEnd(t *testing.T) {
h := newTestServer()
id := registerUser(t, h, "contrib@example.com")
// Admin grants the badge.
rec := do(t, h, http.MethodPost, "/users/"+id+"/verify", mintToken(t, domain.RoleAdmin), nil)
if rec.Code != http.StatusNoContent {
t.Fatalf("admin verify: got %d, body %s", rec.Code, rec.Body)
}
// The change is visible when the contributor logs in.
rec = do(t, h, http.MethodPost, "/login", "", map[string]string{"email": "contrib@example.com", "password": "password123"})
var lr struct {
User struct {
Verified bool `json:"verified"`
} `json:"user"`
}
if err := json.Unmarshal(rec.Body.Bytes(), &lr); err != nil {
t.Fatal(err)
}
if !lr.User.Verified {
t.Error("verified badge not reflected after admin granted it")
}
}
func TestVerifyRequiresAdminRole(t *testing.T) {
h := newTestServer()
id := registerUser(t, h, "someone@example.com")
// A plain user token must not be able to grant the badge.
rec := do(t, h, http.MethodPost, "/users/"+id+"/verify", mintToken(t, domain.RoleUser), nil)
if rec.Code != http.StatusForbidden {
t.Errorf("plain user: got %d, want 403", rec.Code)
}
}
func TestVerifyRequiresAuth(t *testing.T) {
h := newTestServer()
rec := do(t, h, http.MethodPost, "/users/"+uuid.NewString()+"/verify", "", nil)
if rec.Code != http.StatusUnauthorized {
t.Errorf("no token: got %d, want 401", rec.Code)
}
}
func TestVerifyInvalidID(t *testing.T) {
h := newTestServer()
rec := do(t, h, http.MethodPost, "/users/not-a-uuid/verify", mintToken(t, domain.RoleAdmin), nil)
if rec.Code != http.StatusBadRequest {
t.Errorf("bad id: got %d, want 400", rec.Code)
}
}
func TestVerifyUnknownUser(t *testing.T) {
h := newTestServer()
rec := do(t, h, http.MethodPost, "/users/"+uuid.NewString()+"/verify", mintToken(t, domain.RoleAdmin), nil)
if rec.Code != http.StatusNotFound {
t.Errorf("unknown user: got %d, want 404", rec.Code)
}
}
func TestAdminPromotesAndDemotes(t *testing.T) {
h := newTestServer()
id := registerUser(t, h, "promote@example.com")
admin := mintToken(t, domain.RoleAdmin)
if rec := do(t, h, http.MethodPost, "/users/"+id+"/promote", admin, nil); rec.Code != http.StatusNoContent {
t.Fatalf("promote: got %d, body %s", rec.Code, rec.Body)
}
// The promoted user now logs in as an admin.
rec := do(t, h, http.MethodPost, "/login", "", map[string]string{"email": "promote@example.com", "password": "password123"})
var lr struct {
User struct {
Role string `json:"role"`
} `json:"user"`
}
_ = json.Unmarshal(rec.Body.Bytes(), &lr)
if lr.User.Role != "admin" {
t.Errorf("role after promote = %q, want admin", lr.User.Role)
}
if rec := do(t, h, http.MethodPost, "/users/"+id+"/demote", admin, nil); rec.Code != http.StatusNoContent {
t.Fatalf("demote: got %d", rec.Code)
}
}
func TestPromoteRequiresAdmin(t *testing.T) {
h := newTestServer()
id := registerUser(t, h, "target@example.com")
if rec := do(t, h, http.MethodPost, "/users/"+id+"/promote", mintToken(t, domain.RoleUser), nil); rec.Code != http.StatusForbidden {
t.Errorf("plain user promote: got %d, want 403", rec.Code)
}
if rec := do(t, h, http.MethodPost, "/users/"+id+"/promote", "", nil); rec.Code != http.StatusUnauthorized {
t.Errorf("no token: got %d, want 401", rec.Code)
}
}
func TestPromoteUnknownUser(t *testing.T) {
h := newTestServer()
rec := do(t, h, http.MethodPost, "/users/"+uuid.NewString()+"/promote", mintToken(t, domain.RoleAdmin), nil)
if rec.Code != http.StatusNotFound {
t.Errorf("unknown user promote: got %d, want 404", rec.Code)
}
}
func TestUnverifyRevokes(t *testing.T) {
h := newTestServer()
id := registerUser(t, h, "revoke@example.com")
admin := mintToken(t, domain.RoleAdmin)
if rec := do(t, h, http.MethodPost, "/users/"+id+"/verify", admin, nil); rec.Code != http.StatusNoContent {
t.Fatalf("verify: %d", rec.Code)
}
if rec := do(t, h, http.MethodPost, "/users/"+id+"/unverify", admin, nil); rec.Code != http.StatusNoContent {
t.Fatalf("unverify: %d", rec.Code)
}
rec := do(t, h, http.MethodPost, "/login", "", map[string]string{"email": "revoke@example.com", "password": "password123"})
var lr struct {
User struct {
Verified bool `json:"verified"`
} `json:"user"`
}
_ = json.Unmarshal(rec.Body.Bytes(), &lr)
if lr.User.Verified {
t.Error("verified should be false after unverify")
}
}
@@ -0,0 +1,65 @@
package usecase
import (
"context"
"errors"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
)
// BootstrapAdmin seeds the first admin account. It exists because there is no
// other way to create one: /register always makes a plain user, and promoting a
// user to admin requires an already-existing admin. Running it at startup with
// operator-supplied credentials breaks that chicken-and-egg.
type BootstrapAdmin struct {
users UserRepository
hasher PasswordHasher
clk Clock
}
func NewBootstrapAdmin(users UserRepository, hasher PasswordHasher, clk Clock) *BootstrapAdmin {
return &BootstrapAdmin{users: users, hasher: hasher, clk: clk}
}
// Execute creates the admin if it does not already exist, reporting whether it
// created one. It is idempotent: a second run (a restart) finds the account and
// does nothing, so it is safe to call on every boot.
func (uc *BootstrapAdmin) Execute(ctx context.Context, email, password string) (created bool, err error) {
email = domain.NormalizeEmail(email)
if _, err := uc.users.GetByEmail(ctx, email); err == nil {
return false, nil // already bootstrapped
} else if !errors.Is(err, ErrUserNotFound) {
return false, err
}
if len(password) < minPasswordLen {
return false, ErrPasswordTooShort
}
if len(password) > maxPasswordLen {
return false, ErrPasswordTooLong
}
hash, err := uc.hasher.Hash(password)
if err != nil {
return false, err
}
u, err := domain.NewUser(email, hash, uc.clk.Now())
if err != nil {
return false, err
}
// Direct role assignment is safe here: this is a trusted server-side seed,
// not a request. A root admin is also a trusted contributor.
u.Role = domain.RoleAdmin
u.Verified = true
if err := uc.users.Insert(ctx, u); err != nil {
// A concurrent bootstrap (two replicas booting at once) is fine: whoever
// lost the race just observes the account now exists.
if errors.Is(err, ErrEmailExists) {
return false, nil
}
return false, err
}
return true, nil
}
@@ -0,0 +1,71 @@
package usecase_test
import (
"context"
"errors"
"testing"
"time"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/auth"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/memstore"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/usecase"
)
func newBootstrap() (*usecase.BootstrapAdmin, *memstore.UserRepo) {
users := memstore.NewUserRepo()
hasher := auth.NewHasher(4)
clk := memstore.Clock{T: time.Date(2026, 7, 26, 0, 0, 0, 0, time.UTC)}
return usecase.NewBootstrapAdmin(users, hasher, clk), users
}
func TestBootstrapCreatesAdmin(t *testing.T) {
bs, users := newBootstrap()
created, err := bs.Execute(context.Background(), "Root@Example.com", "rootpassword")
if err != nil {
t.Fatalf("bootstrap: %v", err)
}
if !created {
t.Fatal("expected an admin to be created")
}
u, err := users.GetByEmail(context.Background(), "root@example.com")
if err != nil {
t.Fatalf("admin not persisted: %v", err)
}
if u.Role != domain.RoleAdmin {
t.Errorf("role = %q, want admin", u.Role)
}
if !u.Verified {
t.Error("bootstrap admin should be verified")
}
}
func TestBootstrapIsIdempotent(t *testing.T) {
bs, users := newBootstrap()
ctx := context.Background()
if _, err := bs.Execute(ctx, "root@example.com", "rootpassword"); err != nil {
t.Fatal(err)
}
created, err := bs.Execute(ctx, "root@example.com", "rootpassword")
if err != nil {
t.Fatalf("second run: %v", err)
}
if created {
t.Error("second run must not create a duplicate admin")
}
// The account must still be a single admin.
if u, _ := users.GetByEmail(ctx, "root@example.com"); u.Role != domain.RoleAdmin {
t.Errorf("role changed: %q", u.Role)
}
}
func TestBootstrapRejectsWeakPassword(t *testing.T) {
bs, _ := newBootstrap()
if _, err := bs.Execute(context.Background(), "root@example.com", "short"); !errors.Is(err, usecase.ErrPasswordTooShort) {
t.Errorf("got %v, want ErrPasswordTooShort", err)
}
}
@@ -0,0 +1,109 @@
package usecase_test
import (
"context"
"errors"
"testing"
"time"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/usecase"
)
// These stubs let a test inject failures the happy-path memstore never produces,
// so the use cases' error branches are exercised too.
var errBoom = errors.New("boom")
type stubRepo struct {
getByEmail func() (*domain.User, error)
insert func() error
}
func (s stubRepo) Insert(context.Context, *domain.User) error { return s.insert() }
func (s stubRepo) GetByEmail(context.Context, string) (*domain.User, error) {
return s.getByEmail()
}
func (s stubRepo) GetByID(context.Context, uuid.UUID) (*domain.User, error) {
return nil, usecase.ErrUserNotFound
}
func (s stubRepo) SetVerified(context.Context, uuid.UUID, bool) error {
return usecase.ErrUserNotFound
}
func (s stubRepo) SetRole(context.Context, uuid.UUID, domain.Role) error {
return usecase.ErrUserNotFound
}
type stubHasher struct {
hashErr error
compareErr error
}
func (s stubHasher) Hash(string) (string, error) {
if s.hashErr != nil {
return "", s.hashErr
}
return "hashed", nil
}
func (s stubHasher) Compare(string, string) error { return s.compareErr }
type stubIssuer struct{ err error }
func (s stubIssuer) Issue(*domain.User) (string, error) {
if s.err != nil {
return "", s.err
}
return "token", nil
}
func TestRegisterPropagatesHasherError(t *testing.T) {
clk := stubClock{time.Now()}
reg := usecase.NewRegister(stubRepo{}, stubHasher{hashErr: errBoom}, clk)
_, err := reg.Execute(context.Background(), "a@b.com", "password123")
if !errors.Is(err, errBoom) {
t.Errorf("got %v, want errBoom", err)
}
}
func TestRegisterPropagatesInsertError(t *testing.T) {
clk := stubClock{time.Now()}
repo := stubRepo{insert: func() error { return errBoom }}
reg := usecase.NewRegister(repo, stubHasher{}, clk)
_, err := reg.Execute(context.Background(), "a@b.com", "password123")
if !errors.Is(err, errBoom) {
t.Errorf("got %v, want errBoom", err)
}
}
func TestLoginPropagatesRepoError(t *testing.T) {
// A non-ErrUserNotFound repo error must surface as-is, not be masked as
// ErrInvalidCredentials.
repo := stubRepo{getByEmail: func() (*domain.User, error) { return nil, errBoom }}
login := usecase.NewLogin(repo, stubHasher{}, stubIssuer{})
_, _, err := login.Execute(context.Background(), "a@b.com", "password123")
if !errors.Is(err, errBoom) {
t.Errorf("got %v, want errBoom", err)
}
}
func TestLoginPropagatesIssuerError(t *testing.T) {
repo := stubRepo{getByEmail: func() (*domain.User, error) {
return &domain.User{ID: uuid.New(), Email: "a@b.com", Role: domain.RoleUser}, nil
}}
// Hasher accepts the password (nil compareErr) so we reach token issuance.
login := usecase.NewLogin(repo, stubHasher{}, stubIssuer{err: errBoom})
_, _, err := login.Execute(context.Background(), "a@b.com", "password123")
if !errors.Is(err, errBoom) {
t.Errorf("got %v, want errBoom", err)
}
}
type stubClock struct{ t time.Time }
func (c stubClock) Now() time.Time { return c.t }
@@ -0,0 +1,27 @@
package usecase
import "errors"
var (
// Repository-contract errors, returned by UserRepository implementations.
ErrEmailExists = errors.New("email already registered")
ErrUserNotFound = errors.New("user not found")
// ErrWorkerKeyNotFound is returned by WorkerKeyRepository when no live key
// matches (by id for revoke, by hash for exchange).
ErrWorkerKeyNotFound = errors.New("worker key not found")
// ErrInvalidWorkerKey is surfaced to the transport layer for a key that does
// not exchange (unknown, revoked, or owner gone). Deliberately opaque so a
// caller cannot distinguish the cases while probing.
ErrInvalidWorkerKey = errors.New("invalid worker key")
// Use-case errors surfaced to the transport layer.
//
// ErrInvalidCredentials is deliberately returned for both an unknown email
// and a wrong password, so an attacker cannot use the response to learn
// which emails are registered.
ErrInvalidCredentials = errors.New("invalid email or password")
ErrPasswordTooShort = errors.New("password too short")
ErrPasswordTooLong = errors.New("password too long")
ErrInvalidRole = errors.New("invalid role")
)
@@ -0,0 +1,42 @@
package usecase
import (
"context"
"errors"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
)
// Login verifies credentials and issues a signed token.
type Login struct {
users UserRepository
hasher PasswordHasher
tokens TokenIssuer
}
func NewLogin(users UserRepository, hasher PasswordHasher, tokens TokenIssuer) *Login {
return &Login{users: users, hasher: hasher, tokens: tokens}
}
// Execute returns a signed token and the user on success. It returns
// ErrInvalidCredentials for both an unknown email and a wrong password so the
// two cases are indistinguishable to a caller probing for valid accounts.
func (l *Login) Execute(ctx context.Context, email, password string) (string, *domain.User, error) {
u, err := l.users.GetByEmail(ctx, domain.NormalizeEmail(email))
if err != nil {
if errors.Is(err, ErrUserNotFound) {
return "", nil, ErrInvalidCredentials
}
return "", nil, err
}
if err := l.hasher.Compare(u.PasswordHash, password); err != nil {
return "", nil, ErrInvalidCredentials
}
token, err := l.tokens.Issue(u)
if err != nil {
return "", nil, err
}
return token, u, nil
}
@@ -0,0 +1,67 @@
// Package usecase holds the application logic — registration and login — plus
// the ports (interfaces) it depends on. The concrete adapters (PostgreSQL,
// bcrypt, JWT) are injected from cmd, so this package never imports them.
package usecase
import (
"context"
"time"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
)
// UserRepository persists and looks up users. Implementations return the
// sentinel errors in errors.go so the use cases can react without knowing about
// SQL or driver types.
type UserRepository interface {
// Insert stores a new user, returning ErrEmailExists if the email is taken.
Insert(ctx context.Context, u *domain.User) error
// GetByEmail returns the user with the (normalised) email, or ErrUserNotFound.
GetByEmail(ctx context.Context, email string) (*domain.User, error)
// GetByID returns the user with id, or ErrUserNotFound.
GetByID(ctx context.Context, id uuid.UUID) (*domain.User, error)
// SetVerified toggles the verified flag, returning ErrUserNotFound if no
// such user exists.
SetVerified(ctx context.Context, id uuid.UUID, verified bool) error
// SetRole changes a user's role, returning ErrUserNotFound if no such user
// exists.
SetRole(ctx context.Context, id uuid.UUID, role domain.Role) error
}
// WorkerKeyRepository persists and looks up the long-lived worker keys a user
// creates to run a worker bound to their account. Implementations return the
// sentinel errors in errors.go so the use cases stay free of SQL types.
type WorkerKeyRepository interface {
// Insert stores a freshly minted key.
Insert(ctx context.Context, k *domain.WorkerKey) error
// ListByUser returns a user's live (non-revoked) keys, newest first.
ListByUser(ctx context.Context, userID uuid.UUID) ([]*domain.WorkerKey, error)
// GetActiveByHash returns the non-revoked key with the given hash, or
// ErrWorkerKeyNotFound.
GetActiveByHash(ctx context.Context, tokenHash string) (*domain.WorkerKey, error)
// Revoke retires a key the user owns, returning ErrWorkerKeyNotFound when no
// live key with that id belongs to the user.
Revoke(ctx context.Context, id, userID uuid.UUID) error
// TouchLastUsed records a successful exchange. Best-effort: a failure here
// must not fail the exchange itself.
TouchLastUsed(ctx context.Context, id uuid.UUID) error
}
// PasswordHasher hashes and verifies passwords. The bcrypt adapter satisfies it.
type PasswordHasher interface {
Hash(password string) (string, error)
Compare(hash, password string) error
}
// TokenIssuer mints a signed access token for an authenticated user. It takes
// the whole user so trust-bearing claims (role, verified) travel in the token.
type TokenIssuer interface {
Issue(u *domain.User) (string, error)
}
// Clock reads the current time; a fake one makes tests deterministic.
type Clock interface {
Now() time.Time
}
@@ -0,0 +1,56 @@
package usecase
import (
"context"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
)
const (
// minPasswordLen is a floor, not a policy engine — enough to reject the
// obviously weak without pretending to measure real strength.
minPasswordLen = 8
// maxPasswordLen is bcrypt's hard input limit: it ignores bytes past 72, so
// accepting a longer password would silently hash only its prefix.
maxPasswordLen = 72
)
// Register creates a new account: it validates the password, hashes it, builds
// the domain user, and persists it.
type Register struct {
users UserRepository
hasher PasswordHasher
clk Clock
}
func NewRegister(users UserRepository, hasher PasswordHasher, clk Clock) *Register {
return &Register{users: users, hasher: hasher, clk: clk}
}
// Execute registers email/password and returns the persisted user. The returned
// user carries no plaintext password, only its hash.
func (r *Register) Execute(ctx context.Context, email, password string) (*domain.User, error) {
if len(password) < minPasswordLen {
return nil, ErrPasswordTooShort
}
if len(password) > maxPasswordLen {
return nil, ErrPasswordTooLong
}
hash, err := r.hasher.Hash(password)
if err != nil {
return nil, err
}
// NewUser normalises the email and enforces its shape; it returns a domain
// validation error the transport layer maps to 400.
u, err := domain.NewUser(email, hash, r.clk.Now())
if err != nil {
return nil, err
}
if err := r.users.Insert(ctx, u); err != nil {
return nil, err
}
return u, nil
}
@@ -0,0 +1,28 @@
package usecase
import (
"context"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
)
// SetRole promotes or demotes a user. Only an admin may call this (enforced in
// the transport layer); the use case validates the target role and applies it.
type SetRole struct {
users UserRepository
}
func NewSetRole(users UserRepository) *SetRole {
return &SetRole{users: users}
}
// Execute assigns role to the user, returning ErrInvalidRole for an unknown role
// or ErrUserNotFound if the user does not exist.
func (uc *SetRole) Execute(ctx context.Context, id uuid.UUID, role domain.Role) error {
if !role.Valid() {
return ErrInvalidRole
}
return uc.users.SetRole(ctx, id, role)
}
@@ -0,0 +1,133 @@
package usecase_test
import (
"context"
"errors"
"strings"
"testing"
"time"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/auth"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/memstore"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/usecase"
)
const secret = "usecase-test-secret-32-bytes-long!!!"
func newFixtures() (*usecase.Register, *usecase.Login, *memstore.UserRepo) {
users := memstore.NewUserRepo()
hasher := auth.NewHasher(4) // low cost keeps tests fast
clk := memstore.Clock{T: time.Date(2026, 7, 26, 0, 0, 0, 0, time.UTC)}
// The issuer uses the real clock (nil): token expiry is validated against
// wall-clock time, so a fixed issue-time would make tokens instantly stale.
issuer := auth.NewIssuer(secret, time.Hour, nil)
reg := usecase.NewRegister(users, hasher, clk)
login := usecase.NewLogin(users, hasher, issuer)
return reg, login, users
}
func TestRegisterSuccess(t *testing.T) {
reg, _, users := newFixtures()
u, err := reg.Execute(context.Background(), "Alice@Example.com", "password123")
if err != nil {
t.Fatalf("register: %v", err)
}
if u.Email != "alice@example.com" {
t.Errorf("email not normalised: %q", u.Email)
}
if u.Role != domain.RoleUser {
t.Errorf("role = %q, want user", u.Role)
}
if strings.Contains(u.PasswordHash, "password123") {
t.Error("password stored in cleartext")
}
if _, err := users.GetByEmail(context.Background(), "alice@example.com"); err != nil {
t.Errorf("user not persisted: %v", err)
}
}
func TestRegisterDuplicateEmail(t *testing.T) {
reg, _, _ := newFixtures()
ctx := context.Background()
if _, err := reg.Execute(ctx, "dup@example.com", "password123"); err != nil {
t.Fatalf("first register: %v", err)
}
_, err := reg.Execute(ctx, "Dup@example.com", "password123") // different case, same email
if !errors.Is(err, usecase.ErrEmailExists) {
t.Errorf("got %v, want ErrEmailExists", err)
}
}
func TestRegisterPasswordPolicy(t *testing.T) {
reg, _, _ := newFixtures()
ctx := context.Background()
if _, err := reg.Execute(ctx, "a@b.com", "short"); !errors.Is(err, usecase.ErrPasswordTooShort) {
t.Errorf("short password: got %v", err)
}
long := strings.Repeat("x", 73)
if _, err := reg.Execute(ctx, "a@b.com", long); !errors.Is(err, usecase.ErrPasswordTooLong) {
t.Errorf("long password: got %v", err)
}
}
func TestRegisterInvalidEmail(t *testing.T) {
reg, _, _ := newFixtures()
_, err := reg.Execute(context.Background(), "not-an-email", "password123")
if !errors.Is(err, domain.ErrInvalidEmail) {
t.Errorf("got %v, want ErrInvalidEmail", err)
}
}
func TestLoginSuccess(t *testing.T) {
reg, login, _ := newFixtures()
ctx := context.Background()
if _, err := reg.Execute(ctx, "user@example.com", "password123"); err != nil {
t.Fatal(err)
}
token, u, err := login.Execute(ctx, "User@Example.com", "password123")
if err != nil {
t.Fatalf("login: %v", err)
}
if token == "" {
t.Error("empty token")
}
if u.Email != "user@example.com" {
t.Errorf("wrong user returned: %q", u.Email)
}
// The token must verify and carry this user's id.
claims, err := auth.NewIssuer(secret, time.Hour, nil).Verify(token)
if err != nil {
t.Fatalf("issued token does not verify: %v", err)
}
if claims.Subject != u.ID.String() {
t.Errorf("token sub = %q, want %q", claims.Subject, u.ID.String())
}
}
func TestLoginWrongPassword(t *testing.T) {
reg, login, _ := newFixtures()
ctx := context.Background()
if _, err := reg.Execute(ctx, "user@example.com", "password123"); err != nil {
t.Fatal(err)
}
_, _, err := login.Execute(ctx, "user@example.com", "wrongpass1")
if !errors.Is(err, usecase.ErrInvalidCredentials) {
t.Errorf("got %v, want ErrInvalidCredentials", err)
}
}
func TestLoginUnknownEmailIsIndistinguishable(t *testing.T) {
_, login, _ := newFixtures()
_, _, err := login.Execute(context.Background(), "ghost@example.com", "password123")
if !errors.Is(err, usecase.ErrInvalidCredentials) {
t.Errorf("unknown email must return ErrInvalidCredentials, got %v", err)
}
}
@@ -0,0 +1,24 @@
package usecase
import (
"context"
"github.com/google/uuid"
)
// SetVerified grants or revokes a user's trusted-contributor badge. Only an
// admin may call this (enforced in the transport layer); the use case itself
// just applies the change.
type SetVerified struct {
users UserRepository
}
func NewSetVerified(users UserRepository) *SetVerified {
return &SetVerified{users: users}
}
// Execute sets the verified flag on the target user, returning ErrUserNotFound
// if the user does not exist.
func (uc *SetVerified) Execute(ctx context.Context, id uuid.UUID, verified bool) error {
return uc.users.SetVerified(ctx, id, verified)
}
@@ -0,0 +1,73 @@
package usecase_test
import (
"context"
"errors"
"testing"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/memstore"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/usecase"
)
func TestSetVerifiedGrantsAndRevokes(t *testing.T) {
reg, _, users := newFixtures()
ctx := context.Background()
u, err := reg.Execute(ctx, "contrib@example.com", "password123")
if err != nil {
t.Fatal(err)
}
if u.Verified {
t.Fatal("a fresh account must be unverified")
}
sv := usecase.NewSetVerified(users)
if err := sv.Execute(ctx, u.ID, true); err != nil {
t.Fatalf("grant: %v", err)
}
got, _ := users.GetByID(ctx, u.ID)
if !got.Verified {
t.Error("verified flag not set")
}
if err := sv.Execute(ctx, u.ID, false); err != nil {
t.Fatalf("revoke: %v", err)
}
got, _ = users.GetByID(ctx, u.ID)
if got.Verified {
t.Error("verified flag not cleared")
}
}
func TestSetVerifiedUnknownUser(t *testing.T) {
users := memstore.NewUserRepo()
sv := usecase.NewSetVerified(users)
if err := sv.Execute(context.Background(), uuid.New(), true); !errors.Is(err, usecase.ErrUserNotFound) {
t.Errorf("got %v, want ErrUserNotFound", err)
}
}
func TestLoginTokenCarriesVerified(t *testing.T) {
reg, login, users := newFixtures()
ctx := context.Background()
u, err := reg.Execute(ctx, "trusted@example.com", "password123")
if err != nil {
t.Fatal(err)
}
if err := usecase.NewSetVerified(users).Execute(ctx, u.ID, true); err != nil {
t.Fatal(err)
}
_, loggedIn, err := login.Execute(ctx, "trusted@example.com", "password123")
if err != nil {
t.Fatalf("login: %v", err)
}
if !loggedIn.Verified {
t.Error("login must reflect the granted verified flag")
}
}
@@ -0,0 +1,112 @@
package usecase
import (
"context"
"errors"
"time"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
)
// CreateWorkerKey mints a long-lived worker key for a user and returns the
// one-time plaintext to show once.
type CreateWorkerKey struct {
keys WorkerKeyRepository
clock Clock
}
func NewCreateWorkerKey(keys WorkerKeyRepository, clock Clock) *CreateWorkerKey {
return &CreateWorkerKey{keys: keys, clock: clock}
}
// Execute returns the stored key (hash only) and the plaintext secret. The
// secret is never persisted, so this is the sole moment it can be surfaced.
func (uc *CreateWorkerKey) Execute(ctx context.Context, userID uuid.UUID, name string) (*domain.WorkerKey, string, error) {
key, raw, err := domain.NewWorkerKey(userID, name, uc.clock.Now())
if err != nil {
return nil, "", err
}
if err := uc.keys.Insert(ctx, key); err != nil {
return nil, "", err
}
return key, raw, nil
}
// ListWorkerKeys returns a user's live keys for display and management.
type ListWorkerKeys struct {
keys WorkerKeyRepository
}
func NewListWorkerKeys(keys WorkerKeyRepository) *ListWorkerKeys {
return &ListWorkerKeys{keys: keys}
}
func (uc *ListWorkerKeys) Execute(ctx context.Context, userID uuid.UUID) ([]*domain.WorkerKey, error) {
return uc.keys.ListByUser(ctx, userID)
}
// RevokeWorkerKey retires one of the caller's keys.
type RevokeWorkerKey struct {
keys WorkerKeyRepository
}
func NewRevokeWorkerKey(keys WorkerKeyRepository) *RevokeWorkerKey {
return &RevokeWorkerKey{keys: keys}
}
func (uc *RevokeWorkerKey) Execute(ctx context.Context, userID, id uuid.UUID) error {
return uc.keys.Revoke(ctx, id, userID)
}
// ExchangeWorkerKey trades a valid worker key for a short-lived JWT. The JWT
// carries the owner's current role and verified flag, so a worker that refreshes
// after an admin verifies the owner picks up the upgraded trust on its next
// registration.
type ExchangeWorkerKey struct {
keys WorkerKeyRepository
users UserRepository
tokens TokenIssuer
ttl time.Duration
}
func NewExchangeWorkerKey(keys WorkerKeyRepository, users UserRepository, tokens TokenIssuer, ttl time.Duration) *ExchangeWorkerKey {
return &ExchangeWorkerKey{keys: keys, users: users, tokens: tokens, ttl: ttl}
}
// Execute returns a signed token and its lifetime in seconds. Every failure to
// resolve the key to a usable owner collapses to ErrInvalidWorkerKey so a caller
// cannot tell an unknown key from a revoked one or a deleted owner.
func (uc *ExchangeWorkerKey) Execute(ctx context.Context, rawKey string) (string, int, error) {
if rawKey == "" {
return "", 0, ErrInvalidWorkerKey
}
key, err := uc.keys.GetActiveByHash(ctx, domain.HashWorkerKey(rawKey))
if err != nil {
if errors.Is(err, ErrWorkerKeyNotFound) {
return "", 0, ErrInvalidWorkerKey
}
return "", 0, err
}
u, err := uc.users.GetByID(ctx, key.UserID)
if err != nil {
if errors.Is(err, ErrUserNotFound) {
return "", 0, ErrInvalidWorkerKey
}
return "", 0, err
}
token, err := uc.tokens.Issue(u)
if err != nil {
return "", 0, err
}
// Best-effort: a failed timestamp update must not sink an otherwise valid
// exchange the worker depends on to keep running.
_ = uc.keys.TouchLastUsed(ctx, key.ID)
return token, int(uc.ttl.Seconds()), nil
}
@@ -0,0 +1,186 @@
package usecase_test
import (
"context"
"errors"
"testing"
"time"
"github.com/google/uuid"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/auth"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/domain"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/memstore"
"github.com/emil28092005/SciMesh/coordinator/internal/userservice/usecase"
)
// fakeKeyRepo is an in-memory WorkerKeyRepository for the use-case tests.
type fakeKeyRepo struct {
byHash map[string]*domain.WorkerKey
byID map[uuid.UUID]*domain.WorkerKey
touched []uuid.UUID
}
func newFakeKeyRepo() *fakeKeyRepo {
return &fakeKeyRepo{byHash: map[string]*domain.WorkerKey{}, byID: map[uuid.UUID]*domain.WorkerKey{}}
}
func (r *fakeKeyRepo) Insert(_ context.Context, k *domain.WorkerKey) error {
r.byHash[k.TokenHash] = k
r.byID[k.ID] = k
return nil
}
func (r *fakeKeyRepo) ListByUser(_ context.Context, userID uuid.UUID) ([]*domain.WorkerKey, error) {
var out []*domain.WorkerKey
for _, k := range r.byID {
if k.UserID == userID && !k.Revoked() {
out = append(out, k)
}
}
return out, nil
}
func (r *fakeKeyRepo) GetActiveByHash(_ context.Context, hash string) (*domain.WorkerKey, error) {
k, ok := r.byHash[hash]
if !ok || k.Revoked() {
return nil, usecase.ErrWorkerKeyNotFound
}
return k, nil
}
func (r *fakeKeyRepo) Revoke(_ context.Context, id, userID uuid.UUID) error {
k, ok := r.byID[id]
if !ok || k.UserID != userID || k.Revoked() {
return usecase.ErrWorkerKeyNotFound
}
now := time.Now()
k.RevokedAt = &now
return nil
}
func (r *fakeKeyRepo) TouchLastUsed(_ context.Context, id uuid.UUID) error {
r.touched = append(r.touched, id)
return nil
}
func newKeyFixtures(t *testing.T) (*usecase.CreateWorkerKey, *usecase.ExchangeWorkerKey, *usecase.RevokeWorkerKey, *usecase.ListWorkerKeys, *fakeKeyRepo, *domain.User) {
t.Helper()
users := memstore.NewUserRepo()
hasher := auth.NewHasher(4)
clk := memstore.Clock{T: time.Date(2026, 7, 26, 0, 0, 0, 0, time.UTC)}
issuer := auth.NewIssuer(secret, time.Hour, nil)
keys := newFakeKeyRepo()
u, err := usecase.NewRegister(users, hasher, clk).Execute(context.Background(), "worker@example.com", "password123")
if err != nil {
t.Fatalf("seed user: %v", err)
}
return usecase.NewCreateWorkerKey(keys, clk),
usecase.NewExchangeWorkerKey(keys, users, issuer, time.Hour),
usecase.NewRevokeWorkerKey(keys),
usecase.NewListWorkerKeys(keys),
keys, u
}
func TestCreateAndExchangeWorkerKey(t *testing.T) {
create, exchange, _, _, keys, u := newKeyFixtures(t)
ctx := context.Background()
key, raw, err := create.Execute(ctx, u.ID, "home-desktop")
if err != nil {
t.Fatalf("create: %v", err)
}
if key.Name != "home-desktop" || raw == "" {
t.Fatalf("unexpected key %+v raw=%q", key, raw)
}
token, expiresIn, err := exchange.Execute(ctx, raw)
if err != nil {
t.Fatalf("exchange: %v", err)
}
if expiresIn != int((time.Hour).Seconds()) {
t.Errorf("expires_in = %d, want 3600", expiresIn)
}
claims, err := auth.NewIssuer(secret, time.Hour, nil).Verify(token)
if err != nil {
t.Fatalf("issued token does not verify: %v", err)
}
if claims.Subject != u.ID.String() {
t.Errorf("token sub = %q, want owner %q", claims.Subject, u.ID)
}
if len(keys.touched) != 1 || keys.touched[0] != key.ID {
t.Errorf("exchange did not record last-used, touched=%v", keys.touched)
}
}
func TestExchangeUnknownKeyIsInvalid(t *testing.T) {
_, exchange, _, _, _, _ := newKeyFixtures(t)
if _, _, err := exchange.Execute(context.Background(), "scimesh_wk_live_nope"); !errors.Is(err, usecase.ErrInvalidWorkerKey) {
t.Errorf("got %v, want ErrInvalidWorkerKey", err)
}
}
func TestExchangeEmptyKeyIsInvalid(t *testing.T) {
_, exchange, _, _, _, _ := newKeyFixtures(t)
if _, _, err := exchange.Execute(context.Background(), ""); !errors.Is(err, usecase.ErrInvalidWorkerKey) {
t.Errorf("got %v, want ErrInvalidWorkerKey", err)
}
}
func TestExchangeRevokedKeyIsInvalid(t *testing.T) {
create, exchange, revoke, _, _, u := newKeyFixtures(t)
ctx := context.Background()
key, raw, err := create.Execute(ctx, u.ID, "laptop")
if err != nil {
t.Fatal(err)
}
if err := revoke.Execute(ctx, u.ID, key.ID); err != nil {
t.Fatalf("revoke: %v", err)
}
if _, _, err := exchange.Execute(ctx, raw); !errors.Is(err, usecase.ErrInvalidWorkerKey) {
t.Errorf("revoked key still exchanges: %v", err)
}
}
func TestRevokeIsScopedToOwner(t *testing.T) {
create, _, revoke, _, _, u := newKeyFixtures(t)
ctx := context.Background()
key, _, err := create.Execute(ctx, u.ID, "laptop")
if err != nil {
t.Fatal(err)
}
// A different user must not be able to revoke this key.
if err := revoke.Execute(ctx, uuid.New(), key.ID); !errors.Is(err, usecase.ErrWorkerKeyNotFound) {
t.Errorf("cross-owner revoke returned %v, want ErrWorkerKeyNotFound", err)
}
}
func TestListReturnsOnlyLiveKeys(t *testing.T) {
create, _, revoke, list, _, u := newKeyFixtures(t)
ctx := context.Background()
live, _, err := create.Execute(ctx, u.ID, "keep")
if err != nil {
t.Fatal(err)
}
dead, _, err := create.Execute(ctx, u.ID, "drop")
if err != nil {
t.Fatal(err)
}
if err := revoke.Execute(ctx, u.ID, dead.ID); err != nil {
t.Fatal(err)
}
got, err := list.Execute(ctx, u.ID)
if err != nil {
t.Fatalf("list: %v", err)
}
if len(got) != 1 || got[0].ID != live.ID {
t.Errorf("list = %d keys, want only the live one", len(got))
}
}
+58
View File
@@ -0,0 +1,58 @@
# SciMesh installer for Windows: downloads the coordinator binary for this
# machine from the latest GitHub release and installs it under %LOCALAPPDATA%.
#
# powershell -ExecutionPolicy Bypass -c "irm https://raw.githubusercontent.com/emil28092005/SciMesh/main/install.ps1 | iex"
#
# Then run:
#
# coordinator serve --open
$ErrorActionPreference = "Stop"
$Repo = "emil28092005/SciMesh"
$Version = if ($env:SCIMESH_VERSION) { $env:SCIMESH_VERSION } else { "latest" }
$InstallDir = if ($env:SCIMESH_INSTALL_DIR) {
$env:SCIMESH_INSTALL_DIR
} else {
Join-Path $env:LOCALAPPDATA "SciMesh"
}
$Arch = switch ($env:PROCESSOR_ARCHITECTURE) {
"AMD64" { "amd64" }
"ARM64" { "arm64" }
default { throw "unsupported architecture: $env:PROCESSOR_ARCHITECTURE" }
}
if ($Version -eq "latest") {
Write-Host "Resolving the newest SciMesh release (including pre-releases)..."
# /releases/latest only sees stable releases; the API list is newest-first
# across all channels.
try {
$Releases = Invoke-RestMethod -Uri "https://api.github.com/repos/$Repo/releases?per_page=1"
if ($Releases -and $Releases[0].tag_name) {
$Version = $Releases[0].tag_name
Write-Host " -> $Version"
} else {
Write-Host " -> falling back to the stable latest release"
}
} catch {
Write-Host " -> falling back to the stable latest release"
}
}
$Url = "https://github.com/$Repo/releases/download/$Version/coordinator-windows-$Arch.exe"
New-Item -ItemType Directory -Force -Path $InstallDir | Out-Null
$Target = Join-Path $InstallDir "coordinator.exe"
Write-Host "Downloading $Url"
Invoke-WebRequest -Uri $Url -OutFile "$Target.tmp"
Move-Item -Force "$Target.tmp" $Target
Write-Host ""
Write-Host "SciMesh installed: $Target"
& $Target --version
Write-Host ""
Write-Host "Start the platform (one command, everything embedded):"
Write-Host " $Target serve --open"
Write-Host ""
Write-Host "Your data lives in ~\.scimesh. The admin login is printed on first start."
+67
View File
@@ -0,0 +1,67 @@
#!/usr/bin/env bash
# SciMesh installer: downloads the coordinator binary for this OS/architecture
# from the latest GitHub release and installs it locally. One command, no
# picking from a list of files:
#
# curl -fsSL https://raw.githubusercontent.com/emil28092005/SciMesh/main/install.sh | bash
#
# Installed to ~/.local/bin/coordinator (Linux/macOS). Then run:
#
# coordinator serve --open
set -eu
REPO="emil28092005/SciMesh"
VERSION="${SCIMESH_VERSION:-latest}"
INSTALL_DIR="${SCIMESH_INSTALL_DIR:-$HOME/.local/bin}"
case "$(uname -s)" in
Linux) OS="linux" ;;
Darwin) OS="darwin" ;;
*) echo "unsupported OS: $(uname -s)" >&2; exit 1 ;;
esac
case "$(uname -m)" in
x86_64|amd64) ARCH="amd64" ;;
aarch64|arm64) ARCH="arm64" ;;
*) echo "unsupported architecture: $(uname -m)" >&2; exit 1 ;;
esac
if [ "$VERSION" = "latest" ]; then
echo "Resolving the newest SciMesh release (including pre-releases)..."
# GitHub's /releases/latest only sees stable releases; the API list is
# newest-first across all channels. Without jq, pull the first tag_name.
RESOLVED=$(curl -fsSL "https://api.github.com/repos/${REPO}/releases?per_page=1" \
| sed -n 's/.*"tag_name"[[:space:]]*:[[:space:]]*"\([^"]*\)".*/\1/p' | head -1)
if [ -n "$RESOLVED" ]; then
VERSION="$RESOLVED"
echo " -> $VERSION"
else
echo " -> falling back to the stable latest release"
fi
fi
mkdir -p "$INSTALL_DIR"
TARGET="$INSTALL_DIR/coordinator"
URL="https://github.com/${REPO}/releases/download/${VERSION}/coordinator-${OS}-${ARCH}"
echo "Downloading $URL"
curl -fsSL -o "$TARGET.tmp" "$URL"
chmod +x "$TARGET.tmp"
mv "$TARGET.tmp" "$TARGET"
echo
echo "SciMesh installed: $TARGET"
INSTALLED_VERSION=$("$TARGET" --version 2>/dev/null | awk '{print $2}')
"$TARGET" --version
if [ -n "$INSTALLED_VERSION" ] && [ "$INSTALLED_VERSION" != "${VERSION#v}" ]; then
echo
echo "WARNING: expected version $VERSION but got $INSTALLED_VERSION."
echo "This is usually a stale download cache. Re-run the installer in a few"
echo "minutes, or pin the version explicitly:"
echo " SCIMESH_VERSION=${VERSION} bash <(curl -fsSL https://raw.githubusercontent.com/${REPO}/main/install.sh)"
fi
echo
echo "Start the platform (one command, everything embedded):"
echo " $TARGET serve --open"
echo
echo "Your data lives in ~/.scimesh. The admin login is printed on first start."
+35 -22
View File
@@ -38,15 +38,32 @@ The two halves of the project:
## Quick start
The fastest path for a scientist: install the platform with one command and
start it. Everything — the coordinator, its databases, the userservice, and
local workers — is embedded in a single binary; no PostgreSQL, no Docker, no
Python setup.
```bash
# Linux / macOS
curl -fsSL https://raw.githubusercontent.com/emil28092005/SciMesh/main/install.sh | bash
coordinator serve --open
# Windows (PowerShell)
powershell -ExecutionPolicy Bypass -c "irm https://raw.githubusercontent.com/emil28092005/SciMesh/main/install.ps1 | iex"
coordinator serve --open
```
The first start prints the admin login (also stored under `~/.scimesh`), and
`--open` opens the UI in the browser. `coordinator serve --workers 2`
spawns two local workers; `SCIMESH_PIP_PACKAGE` points the managed venv at
your scimesh wheel so scientific workloads can run.
For development, install the Python SDK and run workloads locally:
```bash
python -m venv .venv
source .venv/bin/activate
pip install -e '.[dev]'
```
List the installed SDK workloads and run one locally:
```bash
scimesh workload list
scimesh workload run molwt-filter \
--input molecules.tsv \
@@ -54,12 +71,6 @@ scimesh workload run molwt-filter \
-o filtered.csv
```
Run the local scientific CLI workloads:
```bash
scimesh help
```
Start the full demo (PostgreSQL, coordinator, UI, two workers):
```bash
@@ -71,8 +82,8 @@ make demo-ui
Every `v*` tag pushes a GitHub Release with static binaries for
`coordinator` and `worker-agent` on linux/darwin/windows × amd64/arm64
(plus SHA-256 checksums) and the `coordinator` image on GHCR. Download and
run:
(plus SHA-256 checksums), the installer scripts above, and the `coordinator`
image on GHCR. Download and run:
```bash
curl -L -o coordinator https://github.com/emil28092005/SciMesh/releases/latest/download/coordinator-linux-amd64
@@ -82,15 +93,17 @@ chmod +x coordinator
- **worker-agent** runs anywhere with Python: it spawns
`python -m scimesh.worker.task`, so the machine needs the `scimesh`
package in a venv (`pip install scimesh`) and the usual environment:
`COORDINATOR_URL`, `WORKER_AUTH_TOKEN`, `WORK_DIR`.
- **coordinator** needs PostgreSQL running (`DATABASE_URL`,
`COORDINATOR_STORAGE_DIR`, `JWT_SECRET`); the binary applies its embedded
schema migrations itself on startup (`AUTO_MIGRATE=false` opts out), so no
separate migration step is needed. The interactive wizard provisions the
rest: it checks the database, creates it when missing, generates a
`JWT_SECRET`, and writes a `.env` file (`coordinator setup --help`, or
`make setup`; `--yes` for non-interactive runs). The UI login additionally
requires `USERSERVICE_URL`.
`COORDINATOR_URL`, `WORKER_AUTH_TOKEN`, `WORK_DIR`. The same binary can run
it via `coordinator agent`.
- **coordinator** needs no external services at all in its default mode:
`coordinator serve` embeds SQLite (both databases), the userservice, and
local workers. The `SCIMESH_DB=postgres` engine remains for cluster
deployments (`DATABASE_URL`, `COORDINATOR_STORAGE_DIR`, `JWT_SECRET`); the
binary applies its embedded schema migrations itself on startup
(`AUTO_MIGRATE=false` opts out), and `coordinator setup` provisions a
PostgreSQL deployment interactively. The UI login uses the userservice
(`USERSERVICE_URL`) — embedded by `serve`, or the standalone `users/`
service otherwise.
`coordinator --version` / `worker-agent --version` print the build tag.
Build and serve this documentation site: