Commit Graph
12 Commits
Author SHA1 Message Date
Efremenko Arhip 5d6390fd98 fix(coordinator): stop masking 501 as an internal error
Unimplemented endpoints answered {"error":"internal error"} because the
detail-hiding branch covered everything >= 500, and 501 falls in that range.
That is actively misleading: it sent one debugging session looking for a
database fault when the endpoint simply had no implementation yet.

501 now says "not implemented". It leaks nothing — the client already knows the
status code — while genuine 5xx responses keep hiding their details behind a
request id.
2026-07-22 14:59:15 +03:00
Efremenko Arhip 6517145622 chore(coordinator): add API smoke script and request collection
Two ways to exercise every endpoint, both living in the repo rather than in a
personal Postman workspace:

- scripts/smoke.sh walks the full lifecycle and asserts each status, exiting
  non-zero on the first surprise, so it works in CI as well as by hand;
- api/requests.http drives the same calls from an editor's REST client, with
  later requests reusing ids captured from earlier responses. It doubles as
  API documentation for the worker author.

The script claims until it sees its own job's chunks instead of assuming an
empty queue: a shared development database usually holds pending tasks from
earlier runs, and it takes the attempt number from the claim response, since a
task requeued after an expired lease comes back with attempt 2 or 3.

Note for whoever extends the validation cases: Go matches JSON field names
case-insensitively, so "worker_ID" is accepted as "worker_id". Only a genuinely
unknown key trips DisallowUnknownFields.
2026-07-22 14:53:27 +03:00
Efremenko Arhip f1c3163be4 feat(coordinator): implement PostgreSQL repositories
Replaces the repository stubs with real pgx queries, so the queue now works end
to end: a job is split into tasks, leased to workers one at a time, heartbeated,
completed, and reflected in job progress.

Task claiming is a single statement — SELECT ... FOR UPDATE SKIP LOCKED feeding
an UPDATE — so concurrent coordinators lease different rows instead of blocking
on the same one. Writes use optimistic concurrency: the entity increments its
version in memory, and the UPDATE guards on the previous value.

Retries moved to the transaction level. Once Postgres aborts a transaction with
a serialization failure, replaying one statement inside it cannot help; the unit
of retry is Begin -> fn -> Commit, which is safe because each attempt re-reads
its rows through GetForUpdate.

Adds integration tests behind the `integration` build tag, run against a real
PostgreSQL through TEST_DATABASE_URL: concurrent claiming hands each task to
exactly one worker, job creation rolls back whole, stale writes are refused,
completed results keep chunk order, and expired leases return to the queue.

Two bugs the tests caught:

- a nil parameters map reached a NOT NULL jsonb column as SQL NULL, since pgx
  sends NULL rather than omitting the column and letting DEFAULT '{}' apply;
- replaying an already-recorded result returned 409. The idempotent path leaves
  the entity untouched, so the version guard matched nothing and a successful
  no-op looked like a conflict. CompleteTask now skips the write when the
  entity did not change.
2026-07-22 14:48:58 +03:00
Efremenko Arhip bda22666d7 feat(coordinator): scaffold task-queue service in Go
Adds the SciMesh coordinator: a durable task-queue server on PostgreSQL
that owns all database access, with workers reaching it over HTTP only.

Structured as a modular monolith following Clean Architecture:

  domain     entities and their invariants, no I/O
  usecase    business operations + repository/clock ports
  transport  HTTP handlers, DTOs, auth, error mapping
  storage    PostgreSQL repositories, transactions carried in context
  infra      config, pool, clock, server, lease reaper

Dependencies point strictly inward; domain imports nothing from the module.

Working: layer wiring, routing, shared-token auth, access logging, request
IDs, domain-error to status-code mapping, transactional boundaries,
graceful shutdown (HTTP drain -> reaper stop -> pool close), migrations,
and a Compose stack starting Postgres -> migrations -> coordinator.

The domain is complete and covered by unit tests that need no database:
lease ownership, stale attempts, idempotent result replay, retry budgets,
and lease expiry.

Repository methods are stubs returning ErrNotImplemented (HTTP 501). The
SQL for atomic claiming (FOR UPDATE SKIP LOCKED) and for lease expiry is
written and ready to wire up.

See coordinator/ARCHITECTURE.md for the layer map and a request traced
through every layer.
2026-07-22 13:49:01 +03:00
Emil ccf11403bf Add worker and database implementation briefs 2026-07-21 17:08:07 +03:00
Emil 134c1010f1 Support similar and dissimilar threshold searches 2026-07-13 23:34:58 +03:00
Emil 9c3965a449 Document quick-start help command 2026-07-13 23:05:43 +03:00
Emil 5eb4b2dc1e Add quick-start help command 2026-07-13 23:03:31 +03:00
Emil 34beb8b0aa Refactor into modular molecular workloads 2026-07-13 22:50:56 +03:00
Emil df4bda6acb Translate project documentation to English 2026-07-13 22:29:00 +03:00
Emil e182a614f0 Rename project to SciMesh 2026-07-13 22:26:44 +03:00
Emil b3ff218dfb Initial commit 2026-07-13 18:00:38 +03:00